Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC2.79□□□□□ -1.96
PRKDCP78527 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKDCP78527 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKDCP78527 AL671855.1-201ENST00000446875 1203 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 RPL29P14-201ENST00000495837 428 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 RN7SKP18-201ENST00000516005 275 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKDCP78527 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
PRKDCP78527 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PRKDCP78527 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PRKDCP78527 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 FTLP6-201ENST00000355274 422 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 RNU11-201ENST00000387069 134 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKDCP78527 RPL5P18-201ENST00000406671 891 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.79□□□□□ -1.96
PRKDCP78527 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC2.79□□□□□ -1.96
PRKDCP78527 AL445433.1-201ENST00000457507 257 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKDCP78527 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.79□□□□□ -1.96
PRKDCP78527 RNA5SP446-201ENST00000515955 82 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 MIR3162-201ENST00000581818 82 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 AL360012.1-201ENST00000602813 131 ntBASIC2.79□□□□□ -1.96
PRKDCP78527 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.79□□□□□ -1.96
PRKDCP78527 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PRKDCP78527 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKDCP78527 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.78□□□□□ -1.96
PRKDCP78527 RPL23AP65-201ENST00000475608 468 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AC103843.2-201ENST00000530523 682 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKDCP78527 AL157394.1-201ENST00000562983 1224 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC2.78□□□□□ -1.96
PRKDCP78527 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.78□□□□□ -1.96
PRKDCP78527 AC027216.1-201ENST00000577726 685 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AC130352.1-201ENST00000602979 661 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AC244258.1-201ENST00000637553 1071 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PRKDCP78527 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKDCP78527 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.78□□□□□ -1.96
PRKDCP78527 RPL26P28-201ENST00000451325 435 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.78□□□□□ -1.96
PRKDCP78527 AL606834.2-201ENST00000602954 668 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AC002069.2-201ENST00000603580 883 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PRKDCP78527 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKDCP78527 AC107083.1-201ENST00000439643 279 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKDCP78527 AC087369.1-201ENST00000520775 996 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AC084759.1-201ENST00000561168 290 ntBASIC2.78□□□□□ -1.96
PRKDCP78527 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKDCP78527 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKDCP78527 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.97
PRKDCP78527 ZNF402P-201ENST00000404435 3100 ntBASIC2.78□□□□□ -1.97
PRKDCP78527 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
PRKDCP78527 AL034403.1-201ENST00000399414 885 ntBASIC2.78□□□□□ -1.97
PRKDCP78527 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.78□□□□□ -1.97
PRKDCP78527 HMGN1P11-201ENST00000508668 303 ntBASIC2.78□□□□□ -1.97
PRKDCP78527 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.78□□□□□ -1.97
PRKDCP78527 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC2.78□□□□□ -1.97
PRKDCP78527 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.78□□□□□ -1.97
PRKDCP78527 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.78□□□□□ -1.97
PRKDCP78527 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.78□□□□□ -1.97
PRKDCP78527 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.78□□□□□ -1.97
PRKDCP78527 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms