Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC104971.1-201ENST00000495117 578 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDL3P58872 ENPP7P9-201ENST00000514456 627 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC104417.1-201ENST00000523974 751 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC105129.1-201ENST00000560250 297 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDL3P58872 BPTFP1-201ENST00000579209 492 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 MIR5096-201ENST00000583713 70 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AP001542.2-201ENST00000593141 364 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AL121932.1-201ENST00000605542 214 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC018754.1-201ENST00000607486 925 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC109454.4-201ENST00000623411 649 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AL121594.5-201ENST00000631724 573 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 AC073869.10-201ENST00000642016 354 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 BX649567.1-201ENST00000642071 1134 ntBASIC5.77□□□□□ -1.49
RHBDL3P58872 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDL3P58872 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RHBDL3P58872 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDL3P58872 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDL3P58872 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDL3P58872 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 RNU6-353P-201ENST00000364266 108 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RHBDL3P58872 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 RN7SKP106-201ENST00000410832 272 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC092638.1-201ENST00000411966 1275 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 TAF13P2-201ENST00000416876 286 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 LINC00993-201ENST00000420453 540 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AL009174.1-201ENST00000426577 416 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 RNU7-140P-201ENST00000459546 60 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 RPS4XP12-201ENST00000461747 709 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 RN7SL517P-201ENST00000462240 305 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDL3P58872 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.76□□□□□ -1.49
RHBDL3P58872 SUMO2P5-201ENST00000506790 245 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC111000.3-201ENST00000508057 576 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC091868.1-201ENST00000508746 304 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDL3P58872 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDL3P58872 RNU2-30P-201ENST00000516209 141 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDL3P58872 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 AL110118.1-201ENST00000553543 400 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 MTCO1P40-201ENST00000574371 625 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDL3P58872 AC073091.2-201ENST00000603205 907 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 Z82195.1-201ENST00000604558 398 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDL3P58872 MIR6864-201ENST00000617935 70 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RHBDL3P58872 AL445984.1-201ENST00000637834 659 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDL3P58872 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 AP001273.1-201ENST00000624493 3152 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDL3P58872 AC011447.7-201ENST00000624228 1590 ntBASIC5.76□□□□□ -1.49
RHBDL3P58872 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDL3P58872 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDL3P58872 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 RPS3AP23-201ENST00000401762 784 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 MTCO2P31-201ENST00000402702 684 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms