Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.9□□□□□ -1.63
NR1H2P55055 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NR1H2P55055 LINC01109-201ENST00000603837 3081 ntBASIC4.9□□□□□ -1.63
NR1H2P55055 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NR1H2P55055 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NR1H2P55055 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NR1H2P55055 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NR1H2P55055 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 AC120338.1-201ENST00000625074 1541 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 RNU6-224P-201ENST00000384055 107 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 ANAPC10P1-201ENST00000395991 556 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 AC013429.2-201ENST00000418798 781 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 PAICSP7-201ENST00000419829 962 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 RPS27P18-201ENST00000431701 247 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 GTF2IP3-201ENST00000433887 494 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 GYG1P1-201ENST00000460864 698 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 RPL21P71-201ENST00000465598 459 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 HIGD1AP14-201ENST00000507617 282 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AC093752.1-206ENST00000511823 336 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 RN7SKP99-201ENST00000517028 307 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.89□□□□□ -1.63
NR1H2P55055 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 AL049779.2-201ENST00000553847 315 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AL132857.1-201ENST00000555180 708 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.89□□□□□ -1.63
NR1H2P55055 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.89□□□□□ -1.63
NR1H2P55055 BNIP3P38-201ENST00000601117 544 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 SUGT1P3-202ENST00000604259 383 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
NR1H2P55055 PART1_2.1-201ENST00000612397 250 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AC131238.1-201ENST00000617135 328 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.89□□□□□ -1.63
NR1H2P55055 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AC068620.4-201ENST00000636730 1182 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AC087821.2-201ENST00000637086 450 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.89□□□□□ -1.63
NR1H2P55055 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 MAPK10-286ENST00000641208 8747 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NR1H2P55055 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 SALL4P2-201ENST00000423288 2910 ntBASIC4.89□□□□□ -1.63
NR1H2P55055 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.89□□□□□ -1.63
NR1H2P55055 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NR1H2P55055 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 RNA5SP391-201ENST00000363456 119 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 RNU6-619P-201ENST00000365146 108 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 MIR585-201ENST00000384887 94 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 RN7SKP247-201ENST00000411094 308 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.88□□□□□ -1.63
NR1H2P55055 AC073136.2-201ENST00000417282 849 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 CYCSP10-201ENST00000417973 294 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL449283.1-202ENST00000418249 604 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
NR1H2P55055 FABP7P2-201ENST00000429946 379 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.88□□□□□ -1.63
NR1H2P55055 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.88□□□□□ -1.63
NR1H2P55055 PPIAP17-201ENST00000438507 471 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL357520.1-201ENST00000441557 453 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 HMGB3P6-201ENST00000444896 598 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms