Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AC091860.1-201ENST00000505723 432 ntBASIC4.11□□□□□ -1.75
CDX1P47902 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 AC005351.1-201ENST00000511152 786 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RNA5SP249-201ENST00000516127 99 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RNA5SP373-201ENST00000517271 95 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.11□□□□□ -1.75
CDX1P47902 AC012400.1-201ENST00000518452 381 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AC010376.1-201ENST00000522101 334 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AF279873.1-201ENST00000523393 313 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 OR5AN2P-201ENST00000534535 896 ntBASIC4.11□□□□□ -1.75
CDX1P47902 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
CDX1P47902 HMGN2P6-201ENST00000551091 273 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.11□□□□□ -1.75
CDX1P47902 AC044860.2-201ENST00000561005 179 ntBASIC4.11□□□□□ -1.75
CDX1P47902 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 AP001542.2-201ENST00000593141 364 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AP000769.2-201ENST00000602344 396 ntBASIC4.11□□□□□ -1.75
CDX1P47902 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AC244107.2-201ENST00000611773 76 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RPSAP73-201ENST00000614820 330 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC006213.4-201ENST00000616184 634 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC131238.1-201ENST00000617135 328 ntBASIC4.11□□□□□ -1.75
CDX1P47902 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 MIR6719-201ENST00000622428 87 ntBASIC4.11□□□□□ -1.75
CDX1P47902 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 BMS1P21-201ENST00000634565 365 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC135068.12-201ENST00000637370 931 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC099654.8-201ENST00000637757 681 ntBASIC4.11□□□□□ -1.75
CDX1P47902 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AC108751.5-201ENST00000492880 1336 ntBASIC4.11□□□□□ -1.75
CDX1P47902 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 AL592437.2-201ENST00000421655 2434 ntBASIC4.11□□□□□ -1.75
CDX1P47902 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDX1P47902 SAGE2P-201ENST00000420011 2126 ntBASIC4.1□□□□□ -1.75
CDX1P47902 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDX1P47902 AC092747.4-201ENST00000620519 1861 ntBASIC4.1□□□□□ -1.75
CDX1P47902 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDX1P47902 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 RN7SKP153-201ENST00000365026 316 ntBASIC4.1□□□□□ -1.75
CDX1P47902 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 OR8V1P-201ENST00000395193 873 ntBASIC4.1□□□□□ -1.75
CDX1P47902 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 NUDT19P3-201ENST00000404698 555 ntBASIC4.1□□□□□ -1.75
CDX1P47902 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.1□□□□□ -1.75
CDX1P47902 U3.36-201ENST00000408418 213 ntBASIC4.1□□□□□ -1.75
CDX1P47902 DPPA2P3-201ENST00000411853 655 ntBASIC4.1□□□□□ -1.75
CDX1P47902 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 LIPT1P1-201ENST00000415870 1186 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 AL161722.2-201ENST00000434731 981 ntBASIC4.1□□□□□ -1.75
CDX1P47902 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.1□□□□□ -1.75
CDX1P47902 AC069285.2-201ENST00000440210 275 ntBASIC4.1□□□□□ -1.75
CDX1P47902 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 RPL7P31-201ENST00000450192 724 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 MTATP6P14-201ENST00000455189 673 ntBASIC4.1□□□□□ -1.75
CDX1P47902 RPS18P6-201ENST00000476880 458 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC126121.1-201ENST00000482313 553 ntBASIC4.1□□□□□ -1.75
CDX1P47902 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 AC109462.1-201ENST00000491087 368 ntBASIC4.1□□□□□ -1.75
CDX1P47902 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.1□□□□□ -1.75
CDX1P47902 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 AC119751.4-201ENST00000507498 357 ntBASIC4.1□□□□□ -1.75
CDX1P47902 OR5H4P-201ENST00000510851 923 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 AC118942.1-201ENST00000529674 1035 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.1□□□□□ -1.75
CDX1P47902 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 PDCD5P1-201ENST00000543528 309 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 GSTP1P1-201ENST00000548078 319 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms