Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC008521.2-201ENST00000591021 259 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AP001542.2-201ENST00000593141 364 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AL357094.1-201ENST00000603845 844 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC093424.1-201ENST00000604999 338 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC009974.1-201ENST00000608881 455 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC009163.6-201ENST00000612367 342 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 PART1_2.1-201ENST00000612397 250 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 MIR6861-201ENST00000618657 64 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC010975.3-201ENST00000618727 978 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC004232.3-201ENST00000622977 525 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC097655.1-201ENST00000635075 318 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 OR6C71P-202ENST00000641886 1107 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 DDX18P3-201ENST00000404856 2007 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC111188.2-201ENST00000529697 1387 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 BRAFP1-201ENST00000445336 2703 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 RNU6-1151P-201ENST00000384684 107 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 LRRC37BP1-201ENST00000398851 714 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AL136310.1-201ENST00000404926 654 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 SSR1P2-201ENST00000415208 787 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC092648.1-201ENST00000425870 423 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 IPMKP1-201ENST00000425988 855 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC234064.1-201ENST00000436312 247 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AL450023.3-201ENST00000440592 271 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 HMGB3P6-201ENST00000444896 598 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 RPL36AP39-201ENST00000445859 318 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 RPS27AP15-201ENST00000447672 466 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AL589880.1-201ENST00000448271 287 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 PRDX3P4-201ENST00000470828 747 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 RN7SL799P-201ENST00000475891 298 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC126121.1-201ENST00000482313 553 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 FTH1P24-201ENST00000503502 462 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC074087.1-201ENST00000512059 724 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 RN7SKP96-201ENST00000516948 297 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 snoZ278.1-201ENST00000517059 112 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC074029.1-201ENST00000552531 1044 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 OR4U1P-201ENST00000554958 912 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.06□□□□□ -1.76
NKX2-1P43699 RPL10P14-201ENST00000565265 298 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.06□□□□□ -1.76
NKX2-1P43699 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC234772.3-201ENST00000602277 528 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 FO393422.1-201ENST00000603908 708 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 IMMP1LP1-201ENST00000605170 488 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AP005432.2-201ENST00000608162 586 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 AP000676.4-201ENST00000624659 623 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.06□□□□□ -1.76
NKX2-1P43699 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AC136428.4-201ENST00000634254 1155 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AC090897.3-201ENST00000636973 1157 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
NKX2-1P43699 AP001273.1-201ENST00000624493 3152 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 AL592437.2-201ENST00000421655 2434 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NKX2-1P43699 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms