Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA1P35221 MIR6826-201ENST00000617808 98 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 AC009237.17-201ENST00000618111 748 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 MIR6729-201ENST00000618194 65 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 MIR6886-201ENST00000619864 61 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.83□□□□□ -1.64
CTNNA1P35221 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA1P35221 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA1P35221 AL391684.1-202ENST00000641293 1636 ntBASIC4.83□□□□□ -1.64
CTNNA1P35221 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 MTCO1P18-201ENST00000455518 1419 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNNA1P35221 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CTNNA1P35221 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 RN7SKP115-201ENST00000363177 317 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTNNA1P35221 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 RN7SKP216-201ENST00000411050 312 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AC004690.1-201ENST00000418216 328 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AC140479.3-201ENST00000418944 1126 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AC114814.2-201ENST00000419195 485 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 NRBF2P3-201ENST00000432731 865 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA1P35221 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC004815.1-201ENST00000484185 331 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC110775.1-201ENST00000513721 462 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA1P35221 OR10G5P-201ENST00000532733 358 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.82□□□□□ -1.64
CTNNA1P35221 BGLT3-201ENST00000564523 994 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNNA1P35221 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC005034.4-201ENST00000603612 899 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 AP003117.2-201ENST00000606010 545 ntBASIC4.82□□□□□ -1.64
CTNNA1P35221 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.82□□□□□ -1.64
CTNNA1P35221 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CTNNA1P35221 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA1P35221 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CTNNA1P35221 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA1P35221 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA1P35221 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA1P35221 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CTNNA1P35221 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA1P35221 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA1P35221 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA1P35221 RNA5SP507-201ENST00000363603 121 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTNNA1P35221 RN7SKP267-201ENST00000410381 285 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 DPPA2P3-201ENST00000411853 655 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 EIF2S2P3-201ENST00000428356 999 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 NPM1P34-201ENST00000428821 893 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 ELOCP6-201ENST00000429066 328 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA1P35221 AC068135.1-201ENST00000446164 246 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 MTND2P30-201ENST00000456663 382 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 ELOCP12-201ENST00000458706 328 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC092905.1-201ENST00000467527 949 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA1P35221 AC083829.1-201ENST00000503756 657 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC090071.1-201ENST00000507713 644 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 RNU2-30P-201ENST00000516209 141 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 SNORA76.2-201ENST00000517095 137 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC139103.1-201ENST00000534696 1030 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AP001880.2-201ENST00000538233 448 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AL110118.1-201ENST00000553543 400 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA1P35221 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNNA1P35221 RN7SL652P-201ENST00000577769 300 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC090312.2-201ENST00000582687 378 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC008759.1-201ENST00000589783 983 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 ELOCP28-201ENST00000590044 317 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.81□□□□□ -1.64
CTNNA1P35221 AP002360.3-201ENST00000607673 710 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 AC105074.1-201ENST00000623380 3095 ntBASIC4.81□□□□□ -1.64
CTNNA1P35221 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTNNA1P35221 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA1P35221 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA1P35221 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTNNA1P35221 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms