Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.42□□□□□ -1.54
TM4SF1P30408 AC106730.3-201ENST00000624568 641 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 TCP1P3-201ENST00000414406 1498 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 AC106871.1-201ENST00000568324 3102 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TM4SF1P30408 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.42□□□□□ -1.54
TM4SF1P30408 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
TM4SF1P30408 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TM4SF1P30408 TCP11X1-202ENST00000622971 1372 ntBASIC5.42□□□□□ -1.54
TM4SF1P30408 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
TM4SF1P30408 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TM4SF1P30408 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TM4SF1P30408 RNU1-83P-201ENST00000363426 164 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 RNA5SP175-201ENST00000364275 119 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TM4SF1P30408 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 FCF1P5-201ENST00000406490 482 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 RNU2-17P-201ENST00000410290 190 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC009506.2-201ENST00000420635 840 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 ARL2BPP3-201ENST00000421226 480 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AL160175.1-201ENST00000428124 247 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AC018644.1-201ENST00000429934 551 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.41□□□□□ -1.54
TM4SF1P30408 GOT2P5-201ENST00000433995 546 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AL035551.1-201ENST00000446931 348 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 RPL35AP15-201ENST00000468042 339 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.41□□□□□ -1.54
TM4SF1P30408 RNA5SP446-201ENST00000515955 82 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.41□□□□□ -1.54
TM4SF1P30408 MTND1P36-201ENST00000522384 936 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AL158211.2-201ENST00000607282 395 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TM4SF1P30408 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TM4SF1P30408 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TM4SF1P30408 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.41□□□□□ -1.54
TM4SF1P30408 AL592182.3-201ENST00000642132 3304 ntBASIC5.41□□□□□ -1.54
TM4SF1P30408 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF1P30408 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC104623.2-202ENST00000623477 4002 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF1P30408 NXPH1-205ENST00000602349 1953 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF1P30408 AP000432.2-201ENST00000624164 2048 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TM4SF1P30408 RNU1-20P-201ENST00000363314 162 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 RNU6-225P-201ENST00000384613 103 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 RNU6ATAC-201ENST00000408749 126 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 AC105402.1-201ENST00000413336 545 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 TCEA1P4-201ENST00000415066 844 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AL445584.1-201ENST00000431451 330 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 NMNAT1P2-201ENST00000435192 860 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AL500522.2-201ENST00000448562 343 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF1P30408 RNU7-27P-201ENST00000459281 62 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 AC107398.1-201ENST00000486904 505 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC025918.2-201ENST00000558683 763 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF1P30408 AC011472.4-201ENST00000615848 491 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 AC015914.2-201ENST00000618167 288 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 CR392039.5-201ENST00000623201 510 ntBASIC5.4□□□□□ -1.54
TM4SF1P30408 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TM4SF1P30408 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
TM4SF1P30408 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TM4SF1P30408 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TM4SF1P30408 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TM4SF1P30408 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms