Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC004074.1-201ENST00000421810 1063 ntBASIC5.18□□□□□ -1.58
BDNFP23560 USP9YP9-201ENST00000429406 715 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AL590762.3-201ENST00000436372 640 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.18□□□□□ -1.58
BDNFP23560 AC000111.2-201ENST00000448200 210 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.18□□□□□ -1.58
BDNFP23560 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.18□□□□□ -1.58
BDNFP23560 AURKAPS2-201ENST00000454983 333 ntBASIC5.18□□□□□ -1.58
BDNFP23560 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.18□□□□□ -1.58
BDNFP23560 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BDNFP23560 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BDNFP23560 OR5H3P-201ENST00000502817 919 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.18□□□□□ -1.58
BDNFP23560 AC121161.1-201ENST00000510606 652 ntBASIC5.18□□□□□ -1.58
BDNFP23560 PTGES3P3-201ENST00000511479 482 ntBASIC5.18□□□□□ -1.58
BDNFP23560 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.18□□□□□ -1.58
BDNFP23560 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 AC116553.2-201ENST00000564203 463 ntBASIC5.18□□□□□ -1.58
BDNFP23560 MTND4LP25-201ENST00000570218 163 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.18□□□□□ -1.58
BDNFP23560 MIR3667-201ENST00000581025 74 ntBASIC5.18□□□□□ -1.58
BDNFP23560 MIR4472-2-201ENST00000582069 67 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 AC104687.2-201ENST00000604442 342 ntBASIC5.18□□□□□ -1.58
BDNFP23560 BNIP3P4-201ENST00000604946 565 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC113194.1-201ENST00000606037 500 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AL512506.1-201ENST00000613918 449 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
BDNFP23560 RNU6-156P-201ENST00000621869 107 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC073342.3-201ENST00000624211 193 ntBASIC5.18□□□□□ -1.58
BDNFP23560 AC068620.4-201ENST00000636730 1182 ntBASIC5.18□□□□□ -1.58
BDNFP23560 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.18□□□□□ -1.58
BDNFP23560 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BDNFP23560 SAGE4P-201ENST00000442271 3381 ntBASIC5.18□□□□□ -1.58
BDNFP23560 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
BDNFP23560 MTCO1P14-201ENST00000441695 1559 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC011447.7-201ENST00000624228 1590 ntBASIC5.17□□□□□ -1.58
BDNFP23560 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BDNFP23560 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.17□□□□□ -1.58
BDNFP23560 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.17□□□□□ -1.58
BDNFP23560 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 Z95331.1-201ENST00000623075 23112 ntBASIC5.17□□□□□ -1.58
BDNFP23560 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BDNFP23560 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 BTBD10P2-201ENST00000404779 676 ntBASIC5.17□□□□□ -1.58
BDNFP23560 RNA5SP113-201ENST00000410486 84 ntBASIC5.17□□□□□ -1.58
BDNFP23560 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 AC013429.2-201ENST00000418798 781 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.17□□□□□ -1.58
BDNFP23560 AL513175.1-201ENST00000431492 780 ntBASIC5.17□□□□□ -1.58
BDNFP23560 YWHAEP5-201ENST00000431545 765 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.17□□□□□ -1.58
BDNFP23560 OR1H1P-201ENST00000448731 937 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.17□□□□□ -1.58
BDNFP23560 TPT1P13-201ENST00000449760 499 ntBASIC5.17□□□□□ -1.58
BDNFP23560 BX276092.4-201ENST00000452056 248 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.17□□□□□ -1.58
BDNFP23560 AC093166.2-201ENST00000455969 1017 ntBASIC5.17□□□□□ -1.58
BDNFP23560 GTF2IP12-201ENST00000456547 356 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC245028.2-201ENST00000458673 253 ntBASIC5.17□□□□□ -1.58
BDNFP23560 RPL37P6-202ENST00000464216 403 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.17□□□□□ -1.58
BDNFP23560 AC015724.1-201ENST00000478577 156 ntBASIC5.17□□□□□ -1.58
BDNFP23560 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
BDNFP23560 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 HMGB1P19-201ENST00000517578 577 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.17□□□□□ -1.58
BDNFP23560 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.17□□□□□ -1.58
BDNFP23560 OR5M2P-201ENST00000529003 936 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC113192.3-201ENST00000529152 742 ntBASIC5.17□□□□□ -1.58
BDNFP23560 OR6C73P-201ENST00000546432 358 ntBASIC5.17□□□□□ -1.58
BDNFP23560 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BDNFP23560 UBE2FP2-201ENST00000566646 462 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 AC007497.1-201ENST00000610421 561 ntBASIC5.17□□□□□ -1.58
BDNFP23560 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BDNFP23560 AL022401.1-201ENST00000619498 108 ntBASIC5.17□□□□□ -1.58
BDNFP23560 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.17□□□□□ -1.58
BDNFP23560 AC107081.3-201ENST00000612715 2034 ntBASIC5.17□□□□□ -1.58
BDNFP23560 AC011755.1-201ENST00000623763 2049 ntBASIC5.17□□□□□ -1.58
BDNFP23560 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 AC026951.1-201ENST00000559530 2459 ntBASIC5.17□□□□□ -1.58
BDNFP23560 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BDNFP23560 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BDNFP23560 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
BDNFP23560 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BDNFP23560 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms