Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC105914.1-201ENST00000511798 226 ntBASIC7.03□□□□□ -1.28
RFX1P22670 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 Y_RNA.672-201ENST00000516289 104 ntBASIC7.03□□□□□ -1.28
RFX1P22670 Y_RNA.693-201ENST00000516641 110 ntBASIC7.03□□□□□ -1.28
RFX1P22670 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 LSM6P2-201ENST00000552208 177 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 AC011840.5-201ENST00000582125 771 ntBASIC7.03□□□□□ -1.28
RFX1P22670 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.03□□□□□ -1.28
RFX1P22670 AC103792.1-201ENST00000603591 919 ntBASIC7.03□□□□□ -1.28
RFX1P22670 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 AP001330.5-201ENST00000607176 411 ntBASIC7.03□□□□□ -1.28
RFX1P22670 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 AL020991.1-201ENST00000612314 373 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 AC009033.1-201ENST00000624279 431 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 AC138915.3-201ENST00000562908 1389 ntBASIC7.03□□□□□ -1.28
RFX1P22670 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 AL118496.1-201ENST00000440201 1812 ntBASIC7.03□□□□□ -1.28
RFX1P22670 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
RFX1P22670 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RFX1P22670 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
RFX1P22670 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.02□□□□□ -1.29
RFX1P22670 HSPA8P18-201ENST00000439846 1928 ntBASIC7.02□□□□□ -1.29
RFX1P22670 LINC01613-201ENST00000561476 2780 ntBASIC7.02□□□□□ -1.29
RFX1P22670 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RFX1P22670 RNA5SP140-201ENST00000364524 92 ntBASIC7.02□□□□□ -1.29
RFX1P22670 MRPS6P2-201ENST00000381143 370 ntBASIC7.02□□□□□ -1.29
RFX1P22670 ARF4P3-201ENST00000397387 509 ntBASIC7.02□□□□□ -1.29
RFX1P22670 RPS20P2-201ENST00000402520 389 ntBASIC7.02□□□□□ -1.29
RFX1P22670 RNU6-195P-201ENST00000411352 109 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 RPS3AP9-201ENST00000417027 792 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 AL589872.1-201ENST00000426602 288 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC7.02□□□□□ -1.29
RFX1P22670 AC002486.1-201ENST00000435098 391 ntBASIC7.02□□□□□ -1.29
RFX1P22670 YWHAZP8-201ENST00000436935 731 ntBASIC7.02□□□□□ -1.29
RFX1P22670 CBX1P1-201ENST00000440184 427 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.02□□□□□ -1.29
RFX1P22670 AC132479.1-201ENST00000449160 144 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.02□□□□□ -1.29
RFX1P22670 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 AL354710.1-201ENST00000453641 246 ntBASIC7.02□□□□□ -1.29
RFX1P22670 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 RN7SL39P-201ENST00000462264 297 ntBASIC7.02□□□□□ -1.29
RFX1P22670 RPS29P25-201ENST00000481709 171 ntBASIC7.02□□□□□ -1.29
RFX1P22670 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.02□□□□□ -1.29
RFX1P22670 OR5M14P-201ENST00000506803 618 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AC093664.1-201ENST00000511779 289 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.02□□□□□ -1.29
RFX1P22670 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 AC073916.1-201ENST00000545095 130 ntBASIC7.02□□□□□ -1.29
RFX1P22670 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 AC025678.1-201ENST00000567861 338 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AL078601.3-201ENST00000573303 535 ntBASIC7.02□□□□□ -1.29
RFX1P22670 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.02□□□□□ -1.29
RFX1P22670 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.02□□□□□ -1.29
RFX1P22670 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.02□□□□□ -1.29
RFX1P22670 AL117336.2-201ENST00000602435 335 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AL589743.6-201ENST00000611025 117 ntBASIC7.02□□□□□ -1.29
RFX1P22670 uc_338.31-201ENST00000615595 186 ntBASIC7.02□□□□□ -1.29
RFX1P22670 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.02□□□□□ -1.29
RFX1P22670 U1.41-201ENST00000617626 165 ntBASIC7.02□□□□□ -1.29
RFX1P22670 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.02□□□□□ -1.29
RFX1P22670 CASC19-221ENST00000641309 1382 ntBASIC7.02□□□□□ -1.29
RFX1P22670 AC131971.1-201ENST00000332881 1482 ntBASIC7.02□□□□□ -1.29
RFX1P22670 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
RFX1P22670 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RFX1P22670 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFX1P22670 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms