Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.35□□□□□ -1.71
XRCC1P18887 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
XRCC1P18887 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.35□□□□□ -1.71
XRCC1P18887 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
XRCC1P18887 RNU1-130P-201ENST00000363930 160 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
XRCC1P18887 RNU1-63P-201ENST00000383902 164 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 RNU6-883P-201ENST00000384597 107 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 MIR3065-201ENST00000390137 79 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC136624.1-201ENST00000400791 413 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 RNU4-25P-201ENST00000410569 230 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 GAPDHP49-201ENST00000421421 961 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC073335.1-201ENST00000427776 363 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 CDY14P-201ENST00000431260 1014 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 FTH1P16-201ENST00000435241 552 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 CACYBPP1-201ENST00000438592 684 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 CDY12P-201ENST00000440679 1015 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AL357520.1-201ENST00000441557 453 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 CDY13P-201ENST00000445813 1015 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 CDY23P-201ENST00000451661 1014 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC092905.1-201ENST00000467527 949 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC090543.1-201ENST00000492168 485 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 HMGB3P13-201ENST00000511263 607 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC093770.1-201ENST00000511559 571 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC108120.2-201ENST00000512973 294 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 IGLVIV-65-201ENST00000517313 360 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC010476.1-201ENST00000519111 851 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC124068.1-201ENST00000563131 678 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.35□□□□□ -1.71
XRCC1P18887 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
XRCC1P18887 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.35□□□□□ -1.71
XRCC1P18887 AC015802.5-201ENST00000607478 399 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AL031666.3-201ENST00000609320 1006 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC006338.2-201ENST00000616864 791 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AL023881.1-201ENST00000621088 301 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC015908.5-201ENST00000623289 343 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 AC145207.9-201ENST00000623802 325 ntBASIC4.35□□□□□ -1.71
XRCC1P18887 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
XRCC1P18887 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
XRCC1P18887 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
XRCC1P18887 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
XRCC1P18887 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
XRCC1P18887 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
XRCC1P18887 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
XRCC1P18887 OR5P1P-201ENST00000299512 925 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 RNU1-15P-201ENST00000353977 144 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 RPL32P3-201ENST00000359025 275 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 SNORD74.4-201ENST00000364129 80 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.34□□□□□ -1.71
XRCC1P18887 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
XRCC1P18887 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.34□□□□□ -1.71
XRCC1P18887 IPMKP1-201ENST00000425988 855 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 AC091390.1-201ENST00000433904 331 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 MTND2P2-201ENST00000434633 945 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 CBX1P1-201ENST00000440184 427 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 DHFRP3-201ENST00000455595 559 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 RN7SL98P-201ENST00000462271 300 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.34□□□□□ -1.71
XRCC1P18887 PGBD4P4-201ENST00000509673 613 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.34□□□□□ -1.71
XRCC1P18887 RNA5SP497-201ENST00000516081 97 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 snoU109.6-201ENST00000516831 118 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.34□□□□□ -1.71
XRCC1P18887 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.34□□□□□ -1.71
XRCC1P18887 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.34□□□□□ -1.71
XRCC1P18887 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.34□□□□□ -1.71
XRCC1P18887 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.34□□□□□ -1.71
XRCC1P18887 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.34□□□□□ -1.71
XRCC1P18887 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 AC090312.1-201ENST00000580637 348 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 MIR4697-201ENST00000582977 78 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.34□□□□□ -1.71
XRCC1P18887 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.34□□□□□ -1.71
XRCC1P18887 AC020634.1-201ENST00000608701 549 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 MIR6891-201ENST00000618788 93 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
XRCC1P18887 ASNSP1-201ENST00000518311 1939 ntBASIC4.34□□□□□ -1.71
XRCC1P18887 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
XRCC1P18887 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
XRCC1P18887 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
XRCC1P18887 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
XRCC1P18887 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
XRCC1P18887 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
XRCC1P18887 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
XRCC1P18887 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms