Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SL861P-201ENST00000473793 285 ntBASIC8.45□□□□□ -1.06
CD44P16070 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 AC022296.2-201ENST00000512424 202 ntBASIC8.45□□□□□ -1.06
CD44P16070 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 AP004833.3-201ENST00000531893 322 ntBASIC8.45□□□□□ -1.06
CD44P16070 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.45□□□□□ -1.06
CD44P16070 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 RN7SL3-201ENST00000610674 299 ntBASIC8.45□□□□□ -1.06
CD44P16070 AC245517.5-201ENST00000611529 162 ntBASIC8.45□□□□□ -1.06
CD44P16070 AL451054.1-201ENST00000621770 772 ntBASIC8.45□□□□□ -1.06
CD44P16070 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 AC106800.1-201ENST00000501221 1362 ntBASIC8.45□□□□□ -1.06
CD44P16070 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 COL6A4P1-202ENST00000487147 4317 ntBASIC8.45□□□□□ -1.06
CD44P16070 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 AC008568.2-201ENST00000623862 2313 ntBASIC8.45□□□□□ -1.06
CD44P16070 WBP11P1-201ENST00000562560 1931 ntBASIC8.44□□□□□ -1.06
CD44P16070 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 AC079949.2-201ENST00000617117 2933 ntBASIC8.44□□□□□ -1.06
CD44P16070 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 AL031595.3-201ENST00000624919 14262 ntBASIC8.44□□□□□ -1.06
CD44P16070 RN7SKP76-201ENST00000364419 323 ntBASIC8.44□□□□□ -1.06
CD44P16070 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC8.44□□□□□ -1.06
CD44P16070 RNU6-80P-201ENST00000384195 107 ntBASIC8.44□□□□□ -1.06
CD44P16070 MIR555-201ENST00000384987 96 ntBASIC8.44□□□□□ -1.06
CD44P16070 MT-TP-201ENST00000387461 68 ntBASIC8.44□□□□□ -1.06
CD44P16070 U3.31-201ENST00000408113 216 ntBASIC8.44□□□□□ -1.06
CD44P16070 RNU6-174P-201ENST00000410406 106 ntBASIC8.44□□□□□ -1.06
CD44P16070 DPPA2P3-201ENST00000411853 655 ntBASIC8.44□□□□□ -1.06
CD44P16070 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.44□□□□□ -1.06
CD44P16070 FAR2P4-202ENST00000425399 584 ntBASIC8.44□□□□□ -1.06
CD44P16070 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.44□□□□□ -1.06
CD44P16070 IGKV1OR9-2-201ENST00000431378 277 ntBASIC8.44□□□□□ -1.06
CD44P16070 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC8.44□□□□□ -1.06
CD44P16070 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 RNU7-187P-201ENST00000458985 68 ntBASIC8.44□□□□□ -1.06
CD44P16070 RNU7-167P-201ENST00000459160 62 ntBASIC8.44□□□□□ -1.06
CD44P16070 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 RN7SL395P-201ENST00000462960 291 ntBASIC8.44□□□□□ -1.06
CD44P16070 RN7SL496P-201ENST00000470372 290 ntBASIC8.44□□□□□ -1.06
CD44P16070 AC087385.2-201ENST00000477729 498 ntBASIC8.44□□□□□ -1.06
CD44P16070 RN7SL89P-201ENST00000480252 283 ntBASIC8.44□□□□□ -1.06
CD44P16070 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.44□□□□□ -1.06
CD44P16070 AC006427.1-201ENST00000514359 712 ntBASIC8.44□□□□□ -1.06
CD44P16070 Y_RNA.687-201ENST00000516558 91 ntBASIC8.44□□□□□ -1.06
CD44P16070 AL049779.2-201ENST00000553847 315 ntBASIC8.44□□□□□ -1.06
CD44P16070 AC008521.1-201ENST00000587471 187 ntBASIC8.44□□□□□ -1.06
CD44P16070 CR382285.1-202ENST00000604687 547 ntBASIC8.44□□□□□ -1.06
CD44P16070 NANOGP3-201ENST00000605855 286 ntBASIC8.44□□□□□ -1.06
CD44P16070 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
CD44P16070 MIR6834-201ENST00000622807 81 ntBASIC8.44□□□□□ -1.06
CD44P16070 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.44□□□□□ -1.06
CD44P16070 MFSD8-218ENST00000641186 4448 ntBASIC8.44□□□□□ -1.06
CD44P16070 HSPA8P14-201ENST00000552265 1805 ntBASIC8.44□□□□□ -1.06
CD44P16070 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 PSMC1P7-201ENST00000495689 1315 ntBASIC8.44□□□□□ -1.06
CD44P16070 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CD44P16070 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.44□□□□□ -1.06
CD44P16070 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CD44P16070 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.43□□□□□ -1.06
CD44P16070 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.43□□□□□ -1.06
CD44P16070 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC8.43□□□□□ -1.06
CD44P16070 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
CD44P16070 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.43□□□□□ -1.06
CD44P16070 RNU6-511P-201ENST00000363496 107 ntBASIC8.43□□□□□ -1.06
CD44P16070 RNU6-666P-201ENST00000363499 107 ntBASIC8.43□□□□□ -1.06
CD44P16070 SNORA24.1-201ENST00000384401 135 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms