Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC119751.5-201ENST00000514077 770 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC107016.1-201ENST00000550463 337 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC011471.1-201ENST00000585766 187 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.85□□□□□ -1.63
COL2A1P02458 CLIC4P2-201ENST00000601934 717 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC112230.1-201ENST00000604342 547 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AP005264.7-201ENST00000625003 745 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.85□□□□□ -1.63
COL2A1P02458 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 MIR200C-201ENST00000384980 68 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 MIR634-201ENST00000385208 97 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 TCEA1P4-201ENST00000415066 844 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 OR5BE1P-201ENST00000425977 939 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 AP000949.1-201ENST00000438328 629 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.84□□□□□ -1.63
COL2A1P02458 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.84□□□□□ -1.63
COL2A1P02458 PTMAP3-201ENST00000447474 330 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.84□□□□□ -1.63
COL2A1P02458 RPL7P49-201ENST00000471402 708 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 RPL29P14-201ENST00000495837 428 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 HAUS1P1-201ENST00000505275 832 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AC112206.4-201ENST00000515142 405 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 AP000619.3-201ENST00000535634 1127 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 YPEL5P3-201ENST00000547227 352 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 AC063950.1-201ENST00000552036 308 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AC027176.2-201ENST00000559166 746 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AC120057.2-201ENST00000571520 271 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 ZNF415P1-201ENST00000582279 1166 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.84□□□□□ -1.63
COL2A1P02458 SLC25A36P1-201ENST00000590111 465 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 AC068313.1-201ENST00000604028 1008 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AC011458.1-201ENST00000604034 617 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.84□□□□□ -1.63
COL2A1P02458 MIR7702-201ENST00000621931 59 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 AC106730.3-201ENST00000624568 641 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 OR5BE1P-202ENST00000641168 1176 ntBASIC4.84□□□□□ -1.63
COL2A1P02458 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL2A1P02458 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.84□□□□□ -1.63
COL2A1P02458 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
COL2A1P02458 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL2A1P02458 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.83□□□□□ -1.64
COL2A1P02458 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL2A1P02458 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL2A1P02458 RNU6-213P-201ENST00000384051 104 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL2A1P02458 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.83□□□□□ -1.64
COL2A1P02458 AL358472.1-201ENST00000431295 329 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.83□□□□□ -1.64
COL2A1P02458 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
COL2A1P02458 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.83□□□□□ -1.64
COL2A1P02458 KRT19P6-201ENST00000510983 209 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 RNU6-415P-201ENST00000516252 97 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 AC100770.1-201ENST00000532310 322 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.83□□□□□ -1.64
COL2A1P02458 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.83□□□□□ -1.64
COL2A1P02458 AL592436.1-201ENST00000605135 558 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 AC007342.8-201ENST00000623278 678 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 AP002371.2-201ENST00000624450 503 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL2A1P02458 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.83□□□□□ -1.64
COL2A1P02458 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL2A1P02458 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.83□□□□□ -1.64
COL2A1P02458 AL035425.3-201ENST00000564206 4996 ntBASIC4.83□□□□□ -1.64
COL2A1P02458 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.83□□□□□ -1.64
COL2A1P02458 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
COL2A1P02458 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.83□□□□□ -1.64
COL2A1P02458 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.83□□□□□ -1.64
COL2A1P02458 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
COL2A1P02458 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.82□□□□□ -1.64
COL2A1P02458 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.82□□□□□ -1.64
COL2A1P02458 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.82□□□□□ -1.64
COL2A1P02458 TBCAP1-201ENST00000436520 327 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 CYCSP43-201ENST00000438233 310 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 ARL4AP3-201ENST00000441452 574 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms