Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HMGB1P5-202ENST00000451497 985 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC005229.2-201ENST00000456995 399 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC106872.2-201ENST00000494303 480 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC108145.1-201ENST00000503770 153 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC108120.2-201ENST00000512973 294 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC135001.1-201ENST00000544546 283 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC008083.2-201ENST00000546707 476 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 NOP56P3-201ENST00000549457 385 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC090948.2-201ENST00000607363 564 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC128687.2-201ENST00000609657 566 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 uc_338.9-201ENST00000617424 182 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC091905.4-201ENST00000623432 202 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CR788268.1-201ENST00000603931 1809 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
HLA-DQA1P01909 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.28□□□□□ -1.89
HLA-DQA1P01909 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 MTND4P10-201ENST00000446199 1363 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 LINC00622-201ENST00000562811 1570 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 MIR423-201ENST00000362201 94 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 RNA5SP305-201ENST00000362665 119 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 U3.30-201ENST00000391308 210 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 RHEBP3-201ENST00000411920 351 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 ATP5HP2-201ENST00000433885 485 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AL627308.1-201ENST00000435693 821 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC112498.1-201ENST00000444401 332 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC234781.3-201ENST00000452540 973 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AL354710.1-201ENST00000453641 246 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 RPL7P48-201ENST00000461513 746 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 OR52A4P-202ENST00000481634 799 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC005912.1-201ENST00000495392 255 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC010627.1-201ENST00000503819 1294 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC005798.1-201ENST00000513715 387 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 DEFB109D-201ENST00000529497 240 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC123786.2-201ENST00000603459 275 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AL049844.2-201ENST00000604280 628 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC211433.2-201ENST00000608433 387 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AC104307.1-201ENST00000616142 196 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AP000756.2-201ENST00000624168 2567 ntBASIC3.27□□□□□ -1.89
HLA-DQA1P01909 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1P01909 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 MIR3074-201ENST00000384885 81 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms