Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC083843.2-201ENST00000568248 6253 ntBASIC4.92□□□□□ -1.62
HOXA3O43365 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA3O43365 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA3O43365 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA3O43365 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXA3O43365 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA3O43365 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXA3O43365 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA3O43365 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
HOXA3O43365 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 RBPJP2-201ENST00000618187 1444 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 RNU6-797P-201ENST00000363101 109 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 Y_RNA.372-201ENST00000365599 102 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 RNU6-657P-201ENST00000383904 107 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 RNU1-149P-201ENST00000390870 161 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AP003170.5-201ENST00000397185 335 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 SNRPEP2-201ENST00000397592 279 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 MIR1277-201ENST00000408536 78 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 CHEK2P5-201ENST00000423877 246 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 RPL12P12-201ENST00000424633 501 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 AL161636.2-201ENST00000445179 927 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXA3O43365 RPL39P6-201ENST00000448289 150 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 RPS23P9-201ENST00000448848 438 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 MTND2P24-201ENST00000453434 806 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC005229.2-201ENST00000456995 399 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 RPS15AP1-201ENST00000457423 391 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC013267.1-201ENST00000458227 267 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 POU5F1P7-201ENST00000508759 541 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC026412.2-201ENST00000512270 1075 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXA3O43365 SCARNA21.2-201ENST00000516600 166 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 RNU6-430P-201ENST00000517078 107 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 ARL2BPP5-201ENST00000523141 481 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 IGHV1-14-201ENST00000523391 241 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC013828.2-201ENST00000532487 235 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC068587.4-201ENST00000533893 186 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC079600.1-201ENST00000550326 297 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC122134.1-201ENST00000565664 1104 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC017100.2-201ENST00000584628 355 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC115085.1-201ENST00000588924 229 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC008687.2-201ENST00000597865 520 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC104785.1-201ENST00000603220 588 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AP000907.4-201ENST00000604143 237 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC112191.3-201ENST00000604371 277 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC009027.1-201ENST00000604510 479 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AL136228.1-201ENST00000622221 319 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AP002001.2-201ENST00000529025 1469 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXA3O43365 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 MTCO1P11-201ENST00000429111 1528 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 AC018628.1-201ENST00000624147 3819 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 AC024587.1-201ENST00000505925 2157 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA3O43365 AF287957.1-201ENST00000607368 1595 ntBASIC4.91□□□□□ -1.62
HOXA3O43365 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA3O43365 AC079097.1-201ENST00000512187 1399 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms