Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC009452.1-201ENST00000640823 606 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NACAE9PAV3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AL355852.1-201ENST00000454081 1771 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NACAE9PAV3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NACAE9PAV3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NACAE9PAV3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NACAE9PAV3 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AL672167.2-201ENST00000377164 879 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 AL583835.1-201ENST00000399570 407 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 RPS3AP23-201ENST00000401762 784 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 PTP4A1P1-201ENST00000420539 515 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 ARAFP2-201ENST00000440565 559 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 MTCYBP21-201ENST00000443300 1113 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC010460.2-201ENST00000509054 677 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.29□□□□□ -1.88
NACAE9PAV3 BUD31P1-201ENST00000521828 359 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 C1GALT1P3-201ENST00000522049 819 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC097504.2-201ENST00000608088 454 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 AL161616.1-201ENST00000611867 286 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC083809.1-201ENST00000615051 472 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.29□□□□□ -1.88
NACAE9PAV3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NACAE9PAV3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NACAE9PAV3 AC105074.1-201ENST00000623380 3095 ntBASIC3.29□□□□□ -1.88
NACAE9PAV3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.29□□□□□ -1.88
NACAE9PAV3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NACAE9PAV3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.28□□□□□ -1.88
NACAE9PAV3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NACAE9PAV3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NACAE9PAV3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NACAE9PAV3 AL359715.4-201ENST00000606629 1436 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NACAE9PAV3 RNA5SP307-201ENST00000362863 116 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 SNORD113.2-201ENST00000364166 89 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
NACAE9PAV3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NACAE9PAV3 RPS4XP9-201ENST00000405151 780 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AL512430.2-201ENST00000406786 339 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC062016.2-201ENST00000420950 676 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 CHIAP3-201ENST00000423668 1133 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC044797.1-201ENST00000445744 679 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AL627224.1-201ENST00000448334 444 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.28□□□□□ -1.88
NACAE9PAV3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC011005.3-201ENST00000491624 395 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC119751.4-201ENST00000507498 357 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.28□□□□□ -1.88
NACAE9PAV3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.28□□□□□ -1.88
NACAE9PAV3 RPS27AP18-201ENST00000515536 459 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 RNA5SP360-201ENST00000516555 118 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AF186190.1-201ENST00000517470 480 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.28□□□□□ -1.88
NACAE9PAV3 SOX5P1-201ENST00000524155 1127 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.28□□□□□ -1.88
NACAE9PAV3 RMST_5.1-201ENST00000618704 126 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NACAE9PAV3 AC095038.2-201ENST00000621464 1070 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC009269.6-201ENST00000621778 588 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 AP000843.1-201ENST00000624880 701 ntBASIC3.28□□□□□ -1.88
NACAE9PAV3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.28□□□□□ -1.88
NACAE9PAV3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NACAE9PAV3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NACAE9PAV3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.28□□□□□ -1.88
NACAE9PAV3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms