Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNA5SP103-201ENST00000459503 118 ntBASIC5.09□□□□□ -1.59
RGPD3A6NKT7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 RNA5SP249-201ENST00000516127 99 ntBASIC5.09□□□□□ -1.59
RGPD3A6NKT7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 RNU1-30P-201ENST00000606575 163 ntBASIC5.09□□□□□ -1.59
RGPD3A6NKT7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.09□□□□□ -1.6
RGPD3A6NKT7 AL591419.1-201ENST00000427423 339 ntBASIC5.09□□□□□ -1.6
RGPD3A6NKT7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 RPS4XP10-201ENST00000465034 731 ntBASIC5.09□□□□□ -1.6
RGPD3A6NKT7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.09□□□□□ -1.6
RGPD3A6NKT7 AC007458.1-201ENST00000542812 373 ntBASIC5.09□□□□□ -1.6
RGPD3A6NKT7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 MTCO1P46-201ENST00000451639 1491 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 MIR128-1-201ENST00000384921 82 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 AC006994.1-201ENST00000438212 839 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 RPL37P3-201ENST00000456825 293 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 HMGN1P11-201ENST00000508668 303 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 GNRHR2P1-201ENST00000555315 631 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 SNX6P1-201ENST00000601728 1224 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 AL353726.1-201ENST00000614041 1000 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 AC073530.2-201ENST00000623987 261 ntBASIC5.08□□□□□ -1.6
RGPD3A6NKT7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RGPD3A6NKT7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 NPM1P47-201ENST00000560843 856 ntBASIC5.07□□□□□ -1.6
RGPD3A6NKT7 AC079880.2-201ENST00000603790 1213 ntBASIC5.07□□□□□ -1.6
RGPD3A6NKT7 AC091167.4-201ENST00000605079 184 ntBASIC5.07□□□□□ -1.6
RGPD3A6NKT7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RGPD3A6NKT7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 SNORD3H-201ENST00000384486 214 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 RPL5P24-201ENST00000463742 885 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AC090013.1-201ENST00000485147 480 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 OR5B10P-201ENST00000532869 642 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AC103968.1-201ENST00000557841 573 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AC140113.4-201ENST00000622087 222 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AL390879.2-203ENST00000426943 1121 ntBASIC5.06□□□□□ -1.6
RGPD3A6NKT7 AL591363.1-201ENST00000450091 483 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms