Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL590763.1-201ENST00000398297 1545 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AL442128.2-201ENST00000620246 1824 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC138393.1-206ENST00000540997 1886 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 MIR525-201ENST00000384978 85 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 Z97832.1-201ENST00000402490 328 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00993-201ENST00000420453 540 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL355433.1-201ENST00000422804 300 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 RAC1P8-201ENST00000427086 527 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 RPL12P18-201ENST00000437175 325 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 Z80107.2-201ENST00000445127 392 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC010733.1-201ENST00000451515 401 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AP000563.1-201ENST00000490865 758 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC034244.1-201ENST00000507687 207 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SKP66-201ENST00000516681 231 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC009094.1-201ENST00000564443 426 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC015912.2-201ENST00000571053 181 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SL802P-201ENST00000577858 299 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 MIR5699-201ENST00000578903 90 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 MIR4666A-201ENST00000580160 79 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC069366.1-201ENST00000583159 838 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 BNIP3P24-201ENST00000593398 557 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 VN1R83P-201ENST00000595685 445 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 VN1R78P-201ENST00000597393 564 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC091057.2-201ENST00000602594 792 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL583856.2-201ENST00000606298 543 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC055764.2-201ENST00000610089 670 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC005086.4-201ENST00000623065 213 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL359757.1-201ENST00000623176 255 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AC104446.1-201ENST00000613728 1321 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 MTND4P10-201ENST00000446199 1363 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 AL606537.1-201ENST00000607258 2011 ntBASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.85□□□□□ -1.63
TCRBV7S3A2A0A539 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ZNF876P-202ENST00000398732 1485 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 RNU4-4P-201ENST00000364588 130 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 SNORA40.2-201ENST00000390847 128 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ATP5F1P2-201ENST00000398143 760 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ERHP2-201ENST00000402323 299 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SKP278-201ENST00000410504 342 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 OR4K6P-201ENST00000416478 897 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 MTCO3P21-201ENST00000430791 643 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 PPIAP20-201ENST00000449839 135 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC233982.1-201ENST00000451247 436 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 DNAJC19P8-201ENST00000452887 259 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC113347.3-201ENST00000509113 148 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC110775.1-201ENST00000513721 462 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms