Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 ASNSP3-201ENST00000451989 1306 ntBASIC6.75□□□□□ -1.33
PCDHB11Q9Y5F2 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MKI67P1-201ENST00000604297 1460 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MIR514A2-201ENST00000385131 88 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MIR514A3-201ENST00000385132 88 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 NUP35P1-201ENST00000422734 947 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 PTPN2P1-201ENST00000423212 1072 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC007365.2-201ENST00000428806 458 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL138899.2-201ENST00000439139 499 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL445466.1-201ENST00000448432 357 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AL354714.5-201ENST00000450131 590 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MTND3P16-201ENST00000452205 344 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AP1S2P1-201ENST00000457344 379 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MTCO3P2-201ENST00000457365 171 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC026254.2-201ENST00000475295 371 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC011005.3-201ENST00000491624 395 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 RN7SKP70-201ENST00000516655 271 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 RN7SKP183-201ENST00000517169 324 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-794P-201ENST00000517261 64 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 EEF1B2P2-201ENST00000519625 676 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 PPIAP6-201ENST00000557078 499 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MIR7109-201ENST00000613748 65 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AP005212.3-201ENST00000619964 528 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC079597.1-201ENST00000624306 508 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MAPK10-383ENST00000642032 3390 ntBASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB11Q9Y5F2 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RNU1-24P-201ENST00000364285 165 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RN7SKP189-201ENST00000365042 330 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 MT-TR-201ENST00000387439 65 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RNA5SP176-201ENST00000390956 110 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SNORA11.3-201ENST00000408471 128 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 Y_RNA.605-201ENST00000410577 105 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-193P-201ENST00000410977 107 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RN7SKP58-201ENST00000411010 305 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC017078.1-201ENST00000416146 368 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms