Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 HMGB1P16-201ENST00000447155 540 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 MTND2P25-201ENST00000449028 610 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 NDUFA12P1-201ENST00000455914 406 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 MTND2P28-201ENST00000457540 1044 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 snoU13.1-201ENST00000459157 104 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 APOOP2-201ENST00000461561 539 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 PHBP17-201ENST00000528576 541 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC100814.1-201ENST00000606963 623 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC004241.3-201ENST00000611728 517 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AP000346.3-201ENST00000622821 210 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 AC008785.1-201ENST00000624475 456 ntBASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAPPC4Q9Y296 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRAPPC4Q9Y296 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TRAPPC4Q9Y296 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
TRAPPC4Q9Y296 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.96□□□□□ -1.77
TRAPPC4Q9Y296 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
TRAPPC4Q9Y296 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AL137100.1-201ENST00000556703 1620 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 ASNSP1-201ENST00000518311 1939 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RNA5SP322-201ENST00000363617 119 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RNU1-130P-201ENST00000363930 160 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RPL23AP59-201ENST00000399415 461 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 TMSB10P2-201ENST00000416049 131 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 CEACAMP9-201ENST00000442990 513 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 DHFRP3-201ENST00000455595 559 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RPS29P33-201ENST00000456717 146 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RPL21P126-201ENST00000470049 478 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RN7SL738P-201ENST00000470264 297 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RN7SL585P-201ENST00000470538 280 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 RN7SL810P-201ENST00000493031 276 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AC093720.1-201ENST00000505681 714 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 PDCD5P1-201ENST00000543528 309 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 CR383656.6-201ENST00000550518 394 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 MIR4715-201ENST00000584117 79 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 uc_338.13-201ENST00000618243 179 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.96□□□□□ -1.78
TRAPPC4Q9Y296 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC090971.4-201ENST00000560291 1800 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 RNU1-89P-201ENST00000384592 164 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 ELOCP19-201ENST00000411919 318 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 EIF1P3-201ENST00000423841 334 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC068287.1-201ENST00000430283 295 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AL035551.1-201ENST00000446931 348 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 CCRL1P1-201ENST00000449542 1053 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 RPL31P20-201ENST00000449593 360 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 ABCF2P2-201ENST00000450549 296 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 Z95152.1-201ENST00000453556 656 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC096741.1-201ENST00000472250 846 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC025554.1-201ENST00000505641 188 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 ATP1B1P1-201ENST00000509767 915 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 MIR2114-201ENST00000516645 80 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms