Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 USP9YP20-201ENST00000419224 558 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 PHBP4-201ENST00000437447 837 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 SPRYD7P1-201ENST00000443861 570 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC009963.2-201ENST00000453431 138 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RPS7P10-201ENST00000464254 603 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC094085.1-201ENST00000468914 584 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RPL37P23-201ENST00000492641 294 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 FTH1P23-201ENST00000492727 550 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 Y_RNA.654-201ENST00000497848 106 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RNU6-1095P-201ENST00000516148 108 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RNU6-1153P-201ENST00000516760 105 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RN7SKP233-201ENST00000517005 110 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 IGKV2D-14-201ENST00000522473 355 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RANP3-201ENST00000530970 276 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 VN1R67P-201ENST00000568379 913 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AL034351.1-201ENST00000605288 668 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC013553.3-201ENST00000612943 615 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 AC079178.2-201ENST00000439323 1624 ntBASIC8.76□□□□□ -1.01
RTN4Q9NQC3 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.76□□□□□ -1.01
RTN4Q9NQC3 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 SMG1P1-202ENST00000309865 4223 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 RN7SKP37-201ENST00000364494 296 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 U3.12-201ENST00000364498 214 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 RNU6-692P-201ENST00000384496 107 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 MIR153-1-201ENST00000384914 90 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 RPS7P4-201ENST00000444127 582 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC012512.1-201ENST00000446594 718 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 RPL7L1P1-201ENST00000448259 785 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC007686.1-201ENST00000488511 463 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 TRBVA-201ENST00000498804 316 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AP001922.4-201ENST00000526967 290 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC093012.1-202ENST00000549403 582 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC026826.3-201ENST00000561747 158 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 EIF5AP3-201ENST00000589460 462 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC100843.3-201ENST00000591796 259 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC021646.1-201ENST00000605469 484 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AL390240.1-201ENST00000612950 384 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 USP12-203ENST00000620323 349 ntTSL 3 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AC087645.3-201ENST00000624708 587 ntBASIC8.75□□□□□ -1.01
RTN4Q9NQC3 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RTN4Q9NQC3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms