Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 AL671855.1-201ENST00000446875 1203 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 UBL5P3-201ENST00000475112 231 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 IGHV3-32-201ENST00000519182 355 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 DPPA3P2-201ENST00000553589 478 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 MIR6868-201ENST00000611215 58 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 AC243312.2-201ENST00000623340 601 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.86□□□□□ -1.79
CHD8Q9HCK8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CHD8Q9HCK8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 COTL1P1-201ENST00000422309 375 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AC099063.2-201ENST00000446360 662 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AC106707.2-201ENST00000484182 374 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 RPL7P58-201ENST00000402913 758 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 ATP5A1P2-201ENST00000412323 255 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AL139413.1-201ENST00000421309 217 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 HMGN1P11-201ENST00000508668 303 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AC012493.2-201ENST00000595083 291 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AP001267.4-201ENST00000602598 545 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AL391497.1-201ENST00000608671 547 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 AL031666.3-201ENST00000609320 1006 ntBASIC3.85□□□□□ -1.79
CHD8Q9HCK8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.85□□□□□ -1.79
CHD8Q9HCK8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 OR10J6P-201ENST00000289731 930 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 RNU1-33P-201ENST00000364249 162 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AC092651.1-201ENST00000426110 312 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 NPM1P39-201ENST00000449818 867 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AC104619.4-201ENST00000510773 249 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 MIR7112-201ENST00000616126 65 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 MIR6891-201ENST00000618788 93 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 AC139769.1-204ENST00000472297 1931 ntBASIC3.84□□□□□ -1.79
CHD8Q9HCK8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.84□□□□□ -1.79
CHD8Q9HCK8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AP000563.1-201ENST00000490865 758 ntBASIC3.84□□□□□ -1.8
CHD8Q9HCK8 RN7SL504P-201ENST00000494496 287 ntBASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AC087276.1-201ENST00000529659 480 ntBASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AC007458.1-201ENST00000542812 373 ntBASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AL162574.1-201ENST00000615702 950 ntBASIC3.84□□□□□ -1.8
CHD8Q9HCK8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC3.84□□□□□ -1.8
CHD8Q9HCK8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHD8Q9HCK8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms