Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 RNU6-236P-201ENST00000363886 106 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 LIPT1P1-201ENST00000415870 1186 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 TCEA1P2-201ENST00000420496 906 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL590609.2-201ENST00000421430 368 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC009480.2-201ENST00000422916 432 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL050341.1-201ENST00000447743 313 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 OR51B8P-201ENST00000449892 769 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC009963.2-201ENST00000453431 138 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 GAPDHP56-201ENST00000506031 988 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 TPT1P8-201ENST00000510120 555 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC006427.1-201ENST00000514359 712 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 RN7SKP46-201ENST00000515942 234 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 RN7SKP157-201ENST00000516174 282 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 MTND1P6-201ENST00000523621 946 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC118942.1-201ENST00000529674 1035 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 GCSHP4-201ENST00000538792 439 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC008814.1-201ENST00000603797 406 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL162431.4-201ENST00000604674 411 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL391358.1-201ENST00000605342 190 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC019193.2-201ENST00000610012 634 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 BTBD10P1-201ENST00000549824 1352 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AC090017.1-201ENST00000548612 1779 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RNU5B-1-201ENST00000363286 116 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RNU6-1339P-201ENST00000363574 91 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RNA5SP223-201ENST00000365174 120 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 BMS1P3-201ENST00000372011 932 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 OR52E6-202ENST00000379946 954 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AL021331.1-201ENST00000402817 582 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 NCSTNP1-201ENST00000406229 144 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AP001324.1-201ENST00000428553 399 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC073069.1-201ENST00000428657 441 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC007559.1-201ENST00000428736 355 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 MTND2P8-201ENST00000450555 1025 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC104982.1-201ENST00000478775 574 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 HPRT1P2-201ENST00000505250 544 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RNA5SP43-201ENST00000516559 110 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC090312.2-201ENST00000582687 378 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC023762.1-201ENST00000603280 584 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC105254.2-201ENST00000603636 436 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC104687.2-201ENST00000604442 342 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AP001521.2-201ENST00000608772 546 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC093673.2-201ENST00000609674 331 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC116447.1-201ENST00000613153 453 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC009704.2-201ENST00000618739 483 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC016717.3-201ENST00000624730 554 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 AC099654.8-201ENST00000637757 681 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 MTCO1P6-201ENST00000481192 1384 ntBASIC4.87□□□□□ -1.63
POLR1BQ9H9Y6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms