Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC235565.1-201ENST00000456962 1325 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 MIR375-201ENST00000362103 64 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 Y_RNA.97-201ENST00000363094 102 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 RNU6-171P-201ENST00000384354 107 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 RPS3AP36-201ENST00000398190 775 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC093155.2-201ENST00000420734 937 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 RPS27AP14-201ENST00000422868 454 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 IGBP1P4-201ENST00000503202 879 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC025678.1-201ENST00000567861 338 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 MIR4301-201ENST00000577203 66 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC087283.1-201ENST00000604029 1074 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 BNIP3P10-201ENST00000605360 577 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC108479.2-201ENST00000617314 601 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 AC010329.1-201ENST00000593903 8328 ntBASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UBE2OQ9C0C9 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.32
UBE2OQ9C0C9 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
UBE2OQ9C0C9 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
UBE2OQ9C0C9 AL031985.3-201ENST00000565390 2449 ntBASIC6.84□□□□□ -1.32
UBE2OQ9C0C9 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.84□□□□□ -1.32
UBE2OQ9C0C9 AL136531.3-201ENST00000624378 3658 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 Y_RNA.409-201ENST00000383990 98 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 RNU4-31P-201ENST00000384211 141 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 RN7SKP121-201ENST00000410842 305 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC092745.2-202ENST00000411880 369 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 RPS7P8-201ENST00000418311 581 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 Z93242.1-201ENST00000427102 353 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AL358934.1-201ENST00000432346 324 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC002504.1-201ENST00000438281 691 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 H3F3BP1-201ENST00000440551 403 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AL353093.1-201ENST00000441292 436 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 RPL21P133-201ENST00000443666 476 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 USP9YP12-201ENST00000450481 570 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC092865.4-201ENST00000477936 615 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 FAM172BP-201ENST00000487497 1089 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 RPL39P36-201ENST00000490784 156 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC012170.1-201ENST00000495139 359 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC108078.3-201ENST00000502633 489 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 CDH12P2-201ENST00000504393 298 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 BTG4P1-201ENST00000510421 183 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 RPL7L1P13-201ENST00000511702 739 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 Y_RNA.693-201ENST00000516641 110 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC109635.6-201ENST00000525487 1113 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC239860.2-201ENST00000525886 270 ntBASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UBE2OQ9C0C9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms