Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 IGKV7-3-201ENST00000357453 298 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RNU6-729P-201ENST00000384399 107 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 MIR16-1-201ENST00000385271 89 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 FABP12P1-201ENST00000401911 322 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RPL21P67-201ENST00000402896 478 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RNU4-34P-201ENST00000410431 124 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AL390774.1-201ENST00000411924 246 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC019050.1-201ENST00000418508 492 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC114814.2-201ENST00000419195 485 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RPL34P3-201ENST00000421454 338 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 SUMO2P3-201ENST00000438311 288 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 MTCO2P3-201ENST00000442543 421 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 FAR2P1-206ENST00000449736 709 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 VN1R32P-201ENST00000452234 905 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RPL12P26-201ENST00000452430 487 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 CCDC75P1-201ENST00000469247 791 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AP000797.2-201ENST00000475768 606 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC147055.4-201ENST00000504399 745 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RNU6-678P-201ENST00000516832 109 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC100784.1-201ENST00000522790 310 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 HMGB1P42-201ENST00000532126 553 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC044860.2-201ENST00000561005 179 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AP005403.1-201ENST00000579720 229 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AP000769.2-201ENST00000602344 396 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC131235.4-201ENST00000609288 620 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 RNA5SP440-201ENST00000612665 119 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AL158063.1-201ENST00000615349 536 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AP003072.4-201ENST00000624580 310 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC087565.3-203ENST00000641018 837 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 MIR193BHG-214ENST00000641765 509 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC125336.1-201ENST00000508893 2827 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC004817.4-201ENST00000602396 3625 ntBASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
AMBRA1Q9C0C7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC025574.1-201ENST00000554784 1653 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 MTND4P26-201ENST00000415971 1359 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 DCAF13P3-201ENST00000561147 1334 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 HMGB1P5-201ENST00000255320 642 ntBASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.05□□□□□ -1.6
AMBRA1Q9C0C7 RNA5SP394-201ENST00000364216 119 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms