Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC021851.1-201ENST00000608537 1082 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 AC093783.1-201ENST00000612976 329 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.73□□□□□ -1.65
PKP4Q99569 AC022079.1-201ENST00000621546 602 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 FRG1DP-201ENST00000635586 771 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PKP4Q99569 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PKP4Q99569 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.73□□□□□ -1.65
PKP4Q99569 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.73□□□□□ -1.65
PKP4Q99569 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 AL022393.1-201ENST00000625142 1677 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 AL592437.2-201ENST00000421655 2434 ntBASIC4.73□□□□□ -1.65
PKP4Q99569 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PKP4Q99569 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PKP4Q99569 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 ZNF652P1-201ENST00000442420 1309 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 AC120338.1-201ENST00000625074 1541 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 MTCO2P31-201ENST00000402702 684 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 HMGB3P19-201ENST00000403971 560 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL592310.1-201ENST00000414330 671 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 RPL12P28-201ENST00000430852 489 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 AL357520.1-201ENST00000441557 453 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL591719.1-201ENST00000444669 744 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 Z83846.1-201ENST00000446798 265 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL031313.1-201ENST00000448435 256 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 SLC25A18P1-201ENST00000449385 454 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC234781.3-201ENST00000452540 973 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC093270.2-201ENST00000486157 792 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 RN7SL558P-201ENST00000497468 299 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 NDUFA5P12-201ENST00000503796 343 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 RNU6-709P-201ENST00000517257 104 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.72□□□□□ -1.65
PKP4Q99569 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC021006.3-201ENST00000530771 192 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.72□□□□□ -1.65
PKP4Q99569 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.72□□□□□ -1.65
PKP4Q99569 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.72□□□□□ -1.65
PKP4Q99569 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 SUMO2P14-201ENST00000604488 293 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL450336.1-201ENST00000605180 586 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AC007497.1-201ENST00000610421 561 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AC079395.3-201ENST00000615161 484 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 AC015914.2-201ENST00000618167 288 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 AC006042.3-201ENST00000454684 1469 ntBASIC4.72□□□□□ -1.65
PKP4Q99569 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.72□□□□□ -1.65
PKP4Q99569 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PKP4Q99569 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PKP4Q99569 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PKP4Q99569 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
PKP4Q99569 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKP4Q99569 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.71□□□□□ -1.66
PKP4Q99569 SAMMSON-226ENST00000642089 1582 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKP4Q99569 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKP4Q99569 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PKP4Q99569 RNU6-298P-201ENST00000390888 96 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 AL645733.1-201ENST00000402250 217 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 RPL31P52-201ENST00000407532 367 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 SNORA11B-201ENST00000408175 129 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 OR51B3P-201ENST00000412287 913 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 MTATP6P20-201ENST00000414147 562 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 TMBIM7P-201ENST00000418074 855 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKP4Q99569 AC005005.2-201ENST00000420779 380 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 RGS17P1-201ENST00000423358 553 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 OR52J1P-201ENST00000450596 932 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 RPL23AP23-201ENST00000452590 471 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 RPS17P11-201ENST00000474297 293 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 HMGB1P38-201ENST00000490557 577 ntBASIC4.71□□□□□ -1.66
PKP4Q99569 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKP4Q99569 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.71□□□□□ -1.66
PKP4Q99569 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.71□□□□□ -1.66
PKP4Q99569 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKP4Q99569 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms