Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPS23P6-201ENST00000466136 431 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 RN7SL583P-201ENST00000475692 287 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 RN7SL177P-201ENST00000476596 299 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 ARL4AP1-201ENST00000503220 705 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 RNU6-416P-201ENST00000516265 103 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 HMGB1P23-201ENST00000518743 568 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC007225.2-201ENST00000562529 256 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC068870.1-201ENST00000563737 2455 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 PRPF19P1-201ENST00000584766 898 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 SGO1P1-201ENST00000603525 1447 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC096553.1-201ENST00000605169 829 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL512624.1-201ENST00000613638 469 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL353726.1-201ENST00000614041 1000 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC121761.2-201ENST00000617300 689 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AF246928.1-201ENST00000623768 87 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 HSPA8P18-201ENST00000439846 1928 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AP000776.1-201ENST00000530032 1663 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX18Q96RF0 RN7SKP293-201ENST00000411389 296 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL139421.1-201ENST00000423010 169 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC019178.2-201ENST00000423595 505 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 HSPD1P12-201ENST00000429127 1069 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 RPL7AP49-201ENST00000429522 581 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 RPL12P17-201ENST00000432393 498 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL591438.1-201ENST00000433508 581 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 ATP5F1P1-201ENST00000433775 569 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MUPP-201ENST00000438111 566 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL138878.2-201ENST00000440581 1241 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 EEF1B2P6-201ENST00000445713 673 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL360221.1-201ENST00000445989 335 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 HMGB1P16-201ENST00000447155 540 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC079776.3-201ENST00000450665 370 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 RPL21P134-201ENST00000453468 483 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC104090.1-201ENST00000506341 1171 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL117351.2-201ENST00000513571 157 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 RPL12P22-201ENST00000519073 490 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX18Q96RF0 MIR3915-201ENST00000578518 97 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 MIR4666A-201ENST00000580160 79 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AP001981.2-201ENST00000603241 418 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC055764.2-201ENST00000610089 670 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC022467.1-201ENST00000614738 749 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 AC068792.1-201ENST00000621354 417 ntBASIC4.92□□□□□ -1.62
SNX18Q96RF0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms