Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC011266.1-201ENST00000624119 3569 ntBASIC5.74□□□□□ -1.49
CCDC7Q96M83 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 MARK2P15-201ENST00000432204 2186 ntBASIC5.74□□□□□ -1.49
CCDC7Q96M83 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 RPL23AP46-201ENST00000438548 490 ntBASIC5.74□□□□□ -1.49
CCDC7Q96M83 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC7Q96M83 AC016839.1-201ENST00000578162 867 ntBASIC5.74□□□□□ -1.49
CCDC7Q96M83 MIR5684-201ENST00000585074 65 ntBASIC5.74□□□□□ -1.49
CCDC7Q96M83 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 AC039056.2-201ENST00000622261 511 ntBASIC5.74□□□□□ -1.49
CCDC7Q96M83 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC7Q96M83 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC7Q96M83 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 RLIMP1-201ENST00000339626 1680 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC7Q96M83 RNU6ATAC-201ENST00000408749 126 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 PGBD4P8-201ENST00000412993 562 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 AC108032.1-201ENST00000416706 207 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 AL358472.1-201ENST00000431295 329 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 RPS29P7-201ENST00000439662 171 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 PTMAP3-201ENST00000447474 330 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 RPL7L1P8-201ENST00000469911 741 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 AC079171.1-201ENST00000568788 914 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 AC068020.1-201ENST00000594215 661 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 AC010608.2-201ENST00000624830 470 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 AP005264.7-201ENST00000625003 745 ntBASIC5.73□□□□□ -1.49
CCDC7Q96M83 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CCDC7Q96M83 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 RHOT1P2-201ENST00000366423 333 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 PTMAP2-201ENST00000397627 327 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 RPL23AP2-201ENST00000471227 466 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC017037.1-201ENST00000508460 471 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 RNU7-143P-201ENST00000516781 65 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC012603.1-201ENST00000606424 528 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 AP003072.5-201ENST00000623872 773 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 AC106871.1-201ENST00000568324 3102 ntBASIC5.72□□□□□ -1.49
CCDC7Q96M83 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC7Q96M83 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC7Q96M83 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC7Q96M83 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC7Q96M83 SNORA71.3-201ENST00000362582 128 ntBASIC5.71□□□□□ -1.5
CCDC7Q96M83 RNU11-4P-201ENST00000391149 133 ntBASIC5.71□□□□□ -1.5
CCDC7Q96M83 TPT1P2-201ENST00000413105 503 ntBASIC5.71□□□□□ -1.5
CCDC7Q96M83 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC7Q96M83 OR8F1P-201ENST00000425243 930 ntBASIC5.71□□□□□ -1.5
CCDC7Q96M83 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC7Q96M83 AC010460.1-201ENST00000507087 466 ntBASIC5.71□□□□□ -1.5
CCDC7Q96M83 RNA5SP154-201ENST00000516193 111 ntBASIC5.71□□□□□ -1.5
CCDC7Q96M83 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms