Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 SUMO2P5-201ENST00000506790 245 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 RNU1-6P-201ENST00000516290 144 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC021451.1-201ENST00000523498 1129 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL158211.1-201ENST00000566763 763 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC027455.1-201ENST00000574104 594 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 SS18L2P2-201ENST00000583960 235 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC012254.4-201ENST00000588843 273 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 BNIP3P32-201ENST00000600015 554 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC093673.2-201ENST00000609674 331 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC068870.2-201ENST00000620635 389 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC017104.4-201ENST00000636283 1592 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 RNA5SP305-201ENST00000362665 119 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 RNA5SP151-201ENST00000365632 117 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 RNU1-82P-201ENST00000390851 165 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 RNU6-298P-201ENST00000390888 96 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 MTCO3P4-201ENST00000419236 787 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL590762.4-201ENST00000425885 253 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 DPY19L1P2-201ENST00000426647 915 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 FO393419.3-201ENST00000428741 282 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CYCSP11-201ENST00000436426 315 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 MED6P1-201ENST00000439659 713 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL096803.2-201ENST00000450032 677 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC079168.2-201ENST00000453977 416 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 GTF2IP12-201ENST00000456547 356 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 STMN1P2-201ENST00000508435 439 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 MORF4L1P3-201ENST00000525966 950 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 OR7E13P-201ENST00000526052 910 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL049838.1-201ENST00000563647 981 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC023813.4-201ENST00000607580 580 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC133644.2-201ENST00000608142 540 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AP002799.1-201ENST00000623552 423 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC008993.2-201ENST00000631744 806 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 AC009452.1-201ENST00000640823 606 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 NCLP2-201ENST00000416078 1462 ntBASIC4.69□□□□□ -1.66
SLC44A1Q8WWI5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 MIR320B1-201ENST00000390209 79 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 MIR937-201ENST00000401271 86 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 AL589647.1-201ENST00000402485 466 ntBASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A1Q8WWI5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms