Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC091286.1-201ENST00000431233 461 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 RPS26P2-201ENST00000440331 348 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AP002371.1-201ENST00000463604 433 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 COL6A4P2-205ENST00000509855 506 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC017100.2-201ENST00000584628 355 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 LSM1P2-201ENST00000604911 322 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC007179.3-201ENST00000604976 235 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC016542.1-201ENST00000608259 493 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC015908.5-201ENST00000623289 343 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AC091948.2-201ENST00000636510 279 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 Z82217.1-201ENST00000625157 8149 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SNED1Q8TER0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNED1Q8TER0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 RNU1-44P-201ENST00000384453 163 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AL359643.1-201ENST00000404109 423 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC234781.4-201ENST00000419384 244 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 REREP1Y-201ENST00000422655 198 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 REREP2Y-201ENST00000439103 200 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC104629.1-201ENST00000494226 508 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 ASNSP4-201ENST00000511103 447 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 YPEL5P3-201ENST00000547227 352 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC120057.2-201ENST00000571520 271 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC010487.1-201ENST00000594408 1172 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AL606490.9-201ENST00000603331 271 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC008966.2-201ENST00000606157 453 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AL354950.1-201ENST00000614150 568 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC138965.3-201ENST00000623875 498 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC009093.8-201ENST00000641769 292 ntBASIC5.08□□□□□ -1.6
SNED1Q8TER0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNED1Q8TER0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SNED1Q8TER0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 HSPE1P12-201ENST00000412576 301 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC244453.4-201ENST00000419150 388 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AL034379.1-201ENST00000423216 253 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 NPM1P34-201ENST00000428821 893 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC018635.1-201ENST00000468292 1030 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 ACTR3P3-201ENST00000480448 893 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 BNIP3P41-201ENST00000503774 571 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC006499.6-201ENST00000511169 607 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC009852.2-201ENST00000567898 485 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 QTRT1P1-201ENST00000604344 1078 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC034229.4-201ENST00000607861 441 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC096586.2-201ENST00000610260 441 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC073869.7-201ENST00000640874 297 ntBASIC5.07□□□□□ -1.6
SNED1Q8TER0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNED1Q8TER0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.07□□□□□ -1.6
SNED1Q8TER0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms