Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC104695.2-201ENST00000605056 775 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AL683813.2-201ENST00000605245 502 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC004805.2-201ENST00000605382 482 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC078899.5-201ENST00000612475 178 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC099654.6-201ENST00000636487 512 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC020978.6-201ENST00000571197 3177 ntBASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
NPAS3Q8IXF0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.5-201ENST00000362334 102 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 RNA5SP240-201ENST00000365355 128 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.455-201ENST00000384230 98 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 RPL21P50-201ENST00000417698 477 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC093151.1-201ENST00000427711 313 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC005033.1-201ENST00000428904 813 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC110602.1-201ENST00000437414 318 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CRYGGP-201ENST00000443337 145 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC103563.5-201ENST00000455643 364 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 RN7SL254P-201ENST00000460609 284 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 GM2AP2-201ENST00000491764 562 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 ZNF519P4-201ENST00000514008 125 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC103968.1-201ENST00000557841 573 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 U1.41-201ENST00000617626 165 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 OR2L1P-202ENST00000641567 1023 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 AF287957.1-201ENST00000607368 1595 ntBASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NPAS3Q8IXF0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 NCOA4P3-201ENST00000513203 1877 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 RN7SKP275-201ENST00000364626 301 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.555-201ENST00000384673 110 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 RPL23AP47-201ENST00000408017 460 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 SNORA77.2-201ENST00000408571 112 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 RN7SKP271-201ENST00000410528 320 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC127391.1-201ENST00000411737 98 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC080125.1-201ENST00000414888 684 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms