Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC010486.1-201ENST00000511793 424 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 ZNF519P4-201ENST00000514008 125 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RNU2-46P-201ENST00000517038 113 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-1003P-201ENST00000517099 105 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RPA2P3-201ENST00000533268 770 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 MIR5186-201ENST00000577504 120 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC022884.3-201ENST00000579571 248 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC011712.1-201ENST00000588959 234 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 CKS1BP3-201ENST00000600888 237 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL391646.1-201ENST00000603860 190 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC007621.1-201ENST00000604544 437 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AP001521.1-201ENST00000609150 300 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC093788.1-201ENST00000609356 927 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 Z95327.3-201ENST00000610385 572 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AP006248.2-201ENST00000623309 592 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 SAMMSON-227ENST00000642114 1199 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC097504.1-201ENST00000515103 2415 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL022323.4-201ENST00000623980 13120 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 ZNF402P-201ENST00000404435 3100 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AL355377.1-201ENST00000621125 1653 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 GNG5P1-201ENST00000255500 204 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-845P-201ENST00000362578 103 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 SNORA43.1-201ENST00000364863 140 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-769P-201ENST00000384407 104 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 HMGB1P17-201ENST00000403495 628 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 EIF1P3-201ENST00000423841 334 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AL445669.1-201ENST00000426743 755 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 SAR1AP4-201ENST00000429225 591 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 PPIAP10-201ENST00000438675 458 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 SDCBPP1-201ENST00000440192 890 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RPL23AP16-201ENST00000441715 421 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 GAPDHP23-201ENST00000444823 993 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 HIGD1AP16-201ENST00000450986 258 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 MTND1P12-201ENST00000455231 147 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RPL7AP52-201ENST00000458096 790 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RN7SL552P-201ENST00000462094 276 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RN7SKP283-201ENST00000517197 270 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 VN1R84P-201ENST00000593697 235 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 VN1R80P-201ENST00000597126 338 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AC011500.1-201ENST00000601963 469 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AL161729.3-201ENST00000603533 673 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AL050343.2-201ENST00000607338 280 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 AL160413.1-201ENST00000622780 310 ntBASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE3DQ7Z6J8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms