Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC067945.1-201ENST00000342609 618 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 RNA5SP175-201ENST00000364275 119 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 BX510359.1-201ENST00000456973 237 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC022695.1-201ENST00000522089 237 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC025627.2-201ENST00000576220 160 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DDX18P6-201ENST00000450119 1997 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 SAMMSON-213ENST00000641336 1521 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 SNORA60-201ENST00000362396 134 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AL391219.1-201ENST00000422570 483 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 CYCSP4-201ENST00000429682 331 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 RPL29P14-201ENST00000495837 428 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 RN7SKP141-201ENST00000516167 338 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC124312.6-202ENST00000623624 418 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 OR52Y1P-201ENST00000452418 828 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 IGLV3-26-201ENST00000520756 302 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC090151.1-201ENST00000520784 730 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 U3.45-201ENST00000607547 219 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 AL133268.1-201ENST00000405676 1401 ntBASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 SNORD35B-201ENST00000363660 87 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RN7SL429P-201ENST00000479090 223 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RN7SL489P-201ENST00000486185 223 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RN7SL327P-201ENST00000488659 223 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 SNORA70.24-201ENST00000517233 118 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC068993.1-201ENST00000546724 589 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AL031666.3-201ENST00000609320 1006 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RN7SL853P-201ENST00000617250 223 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC005326.1-201ENST00000429197 123 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 HMGB1P37-201ENST00000439613 609 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC092641.1-201ENST00000440229 772 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RPL21P23-201ENST00000446654 460 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RPS26P28-201ENST00000470806 348 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC104619.4-201ENST00000510773 249 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RNA5SP399-201ENST00000364003 117 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms