Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC110792.3-201ENST00000595906 1614 ntBASIC4.39□□□□□ -1.71
SIX1Q15475 AC245100.2-201ENST00000454544 1679 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SIX1Q15475 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 SNORD115-48-201ENST00000364764 76 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 SNORD65-201ENST00000391079 73 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AL356057.1-202ENST00000402263 756 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 RPS16P5-201ENST00000406501 404 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AL807761.1-201ENST00000417622 171 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 NIPA2P1-201ENST00000426223 976 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX1Q15475 RPL23AP1-201ENST00000428990 471 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 VDAC1P6-201ENST00000430062 855 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX1Q15475 EEF1A1P1-201ENST00000447052 739 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX1Q15475 RAD23BP3-201ENST00000454157 1152 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 RPL23AP81-201ENST00000455252 467 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX1Q15475 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX1Q15475 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SIX1Q15475 AC016550.3-201ENST00000515706 767 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX1Q15475 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX1Q15475 AC068020.1-201ENST00000594215 661 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AC098483.2-201ENST00000603158 454 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AC113403.1-201ENST00000604910 193 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AL451049.1-201ENST00000608672 497 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AL159169.2-201ENST00000610061 1269 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 AC019080.5-201ENST00000624891 757 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SIX1Q15475 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX1Q15475 TTC39DP-201ENST00000416781 1688 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 AL132640.2-201ENST00000559968 1698 ntBASIC4.38□□□□□ -1.71
SIX1Q15475 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC017002.4-201ENST00000604721 1525 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 AC079741.1-201ENST00000321498 212 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC016397.1-201ENST00000412463 242 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 FAR2P2-201ENST00000413041 594 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 NRBF2P2-201ENST00000413087 861 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC119751.6-201ENST00000416712 186 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 MFSD13B-201ENST00000420133 1290 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX1Q15475 AL356387.2-201ENST00000422272 243 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 EIF1P3-201ENST00000423841 334 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 FAR2P4-202ENST00000425399 584 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX1Q15475 ZNF965P-201ENST00000432501 817 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 CEACAMP1-201ENST00000434624 1035 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX1Q15475 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC073264.2-201ENST00000448886 166 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.37□□□□□ -1.71
SIX1Q15475 RPS29P33-201ENST00000456717 146 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 RN7SL691P-201ENST00000494487 301 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 CEACAMP10-202ENST00000495431 496 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC010374.1-201ENST00000503762 1237 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC093770.1-201ENST00000511559 571 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 RNA5SP73-201ENST00000516744 108 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX1Q15475 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX1Q15475 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC068831.4-201ENST00000556118 109 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX1Q15475 AC234771.5-201ENST00000600161 514 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX1Q15475 AL450270.1-201ENST00000606160 391 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC025016.1-201ENST00000616746 682 ntBASIC4.37□□□□□ -1.71
SIX1Q15475 AC233309.1-201ENST00000619522 751 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms