Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.45□□□□□ -1.7
CBX1P83916 ZFRP1-201ENST00000457579 2970 ntBASIC4.44□□□□□ -1.7
CBX1P83916 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CBX1P83916 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 PRO1804-201ENST00000623780 2050 ntBASIC4.44□□□□□ -1.7
CBX1P83916 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CBX1P83916 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX1P83916 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CBX1P83916 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX1P83916 GTF2IP5-201ENST00000414608 731 ntBASIC4.44□□□□□ -1.7
CBX1P83916 TRGV6-201ENST00000417928 299 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AL159169.1-201ENST00000421119 127 ntBASIC4.44□□□□□ -1.7
CBX1P83916 DPY19L1P2-201ENST00000426647 915 ntBASIC4.44□□□□□ -1.7
CBX1P83916 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AL121776.1-201ENST00000429337 372 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX1P83916 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.44□□□□□ -1.7
CBX1P83916 AC023512.1-201ENST00000444513 499 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX1P83916 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX1P83916 PPIAP21-201ENST00000464473 501 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AC010307.1-201ENST00000467206 836 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AC108120.2-201ENST00000512973 294 ntBASIC4.44□□□□□ -1.7
CBX1P83916 OR7E128P-201ENST00000532736 1024 ntBASIC4.44□□□□□ -1.7
CBX1P83916 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX1P83916 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.44□□□□□ -1.7
CBX1P83916 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 AC007599.1-201ENST00000568688 1174 ntBASIC4.44□□□□□ -1.7
CBX1P83916 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.44□□□□□ -1.7
CBX1P83916 VN1R79P-201ENST00000593540 513 ntBASIC4.44□□□□□ -1.7
CBX1P83916 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX1P83916 AC095055.1-201ENST00000603472 1113 ntBASIC4.44□□□□□ -1.7
CBX1P83916 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX1P83916 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.44□□□□□ -1.7
CBX1P83916 OR6R2P-201ENST00000609216 300 ntBASIC4.44□□□□□ -1.7
CBX1P83916 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.44□□□□□ -1.7
CBX1P83916 AC016957.2-201ENST00000616998 848 ntBASIC4.44□□□□□ -1.7
CBX1P83916 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.44□□□□□ -1.7
CBX1P83916 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.44□□□□□ -1.7
CBX1P83916 CR381670.1-201ENST00000624291 1693 ntBASIC4.44□□□□□ -1.7
CBX1P83916 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CBX1P83916 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CBX1P83916 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CBX1P83916 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CBX1P83916 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX1P83916 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CBX1P83916 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX1P83916 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX1P83916 SNORA17.1-201ENST00000362945 126 ntBASIC4.43□□□□□ -1.7
CBX1P83916 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CBX1P83916 RNU6-146P-201ENST00000384602 108 ntBASIC4.43□□□□□ -1.7
CBX1P83916 U3.30-201ENST00000391308 210 ntBASIC4.43□□□□□ -1.7
CBX1P83916 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CBX1P83916 RN7SKP293-201ENST00000411389 296 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AL450992.3-201ENST00000413192 568 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AC019050.1-201ENST00000418508 492 ntBASIC4.43□□□□□ -1.7
CBX1P83916 DDX39BP1-205ENST00000422507 192 ntBASIC4.43□□□□□ -1.7
CBX1P83916 RBMY1KP-201ENST00000423480 476 ntBASIC4.43□□□□□ -1.7
CBX1P83916 RPL12P34-201ENST00000424532 479 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AL445528.1-201ENST00000426330 420 ntBASIC4.43□□□□□ -1.7
CBX1P83916 RPL7L1P9-201ENST00000431298 745 ntBASIC4.43□□□□□ -1.7
CBX1P83916 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX1P83916 FAR2P1-206ENST00000449736 709 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AC004801.2-202ENST00000463559 283 ntBASIC4.43□□□□□ -1.7
CBX1P83916 RPS27AP16-201ENST00000492222 470 ntBASIC4.43□□□□□ -1.7
CBX1P83916 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CBX1P83916 COX6B1P5-201ENST00000509843 249 ntBASIC4.43□□□□□ -1.7
CBX1P83916 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.43□□□□□ -1.7
CBX1P83916 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX1P83916 RNU1-6P-201ENST00000516290 144 ntBASIC4.43□□□□□ -1.7
CBX1P83916 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.43□□□□□ -1.7
CBX1P83916 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.43□□□□□ -1.7
CBX1P83916 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX1P83916 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.43□□□□□ -1.7
CBX1P83916 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.43□□□□□ -1.7
CBX1P83916 DEFB109D-201ENST00000529497 240 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.43□□□□□ -1.7
CBX1P83916 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.43□□□□□ -1.7
CBX1P83916 MIR3186-201ENST00000577404 85 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AC245128.3-201ENST00000594721 748 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AL049844.2-201ENST00000604280 628 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AL359513.1-201ENST00000614364 557 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX1P83916 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CBX1P83916 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.43□□□□□ -1.7
CBX1P83916 LINC00216-201ENST00000623548 1126 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AC136428.4-201ENST00000634254 1155 ntBASIC4.43□□□□□ -1.7
CBX1P83916 AL773545.4-201ENST00000637262 310 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms