Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H3AP68431 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 RNA5SP388-201ENST00000362584 119 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 RNA5SP36-201ENST00000410197 133 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 RNA5SP39-201ENST00000411245 120 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 OR52Y1P-201ENST00000452418 828 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 NDUFA12P1-201ENST00000455914 406 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC013356.1-201ENST00000489027 564 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC008958.1-201ENST00000511047 682 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC063950.1-201ENST00000552036 308 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 MIR4443-201ENST00000585052 53 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AL356218.2-201ENST00000605264 187 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AC139713.2-214ENST00000642059 1811 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 Z73965.1-201ENST00000623412 2297 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 AL356489.2-201ENST00000566968 3528 ntBASIC3.69□□□□□ -1.82
HIST1H3AP68431 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H3AP68431 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H3AP68431 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 OR4K17-201ENST00000315543 1032 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 RNU4-39P-201ENST00000362455 127 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 RNU1-132P-201ENST00000364300 164 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AL450992.3-201ENST00000413192 568 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 RPL12P34-201ENST00000424532 479 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 RWDD4P2-201ENST00000426392 563 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC023141.6-201ENST00000429418 337 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 YWHAEP5-201ENST00000431545 765 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 RPS29P19-201ENST00000479709 171 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 RWDD4P1-201ENST00000488019 565 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 RNA5SP519-201ENST00000516480 119 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 IGHV3-63-201ENST00000518422 341 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC007448.1-201ENST00000582714 234 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC015922.4-201ENST00000612568 690 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AL139254.3-201ENST00000641097 674 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 AC092162.3-201ENST00000624511 1624 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 PHKBP1-201ENST00000450951 1951 ntBASIC3.68□□□□□ -1.82
HIST1H3AP68431 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H3AP68431 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H3AP68431 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HIST1H3AP68431 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.67□□□□□ -1.82
HIST1H3AP68431 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HIST1H3AP68431 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HIST1H3AP68431 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H3AP68431 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HIST1H3AP68431 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H3AP68431 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HIST1H3AP68431 SNORA37-201ENST00000384504 129 ntBASIC3.67□□□□□ -1.82
HIST1H3AP68431 MIR585-201ENST00000384887 94 ntBASIC3.67□□□□□ -1.82
HIST1H3AP68431 AC068287.1-201ENST00000430283 295 ntBASIC3.67□□□□□ -1.82
HIST1H3AP68431 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms