Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.59□□□□□ -1.68
CDH13P55290 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH13P55290 AL450326.2-201ENST00000421913 1962 ntBASIC4.58□□□□□ -1.68
CDH13P55290 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH13P55290 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 AC073055.1-201ENST00000456901 1621 ntBASIC4.58□□□□□ -1.68
CDH13P55290 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 NCLP2-201ENST00000416078 1462 ntBASIC4.58□□□□□ -1.68
CDH13P55290 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH13P55290 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH13P55290 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH13P55290 AC092435.4-201ENST00000623012 4159 ntBASIC4.58□□□□□ -1.68
CDH13P55290 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 RNU6-1339P-201ENST00000363574 91 ntBASIC4.58□□□□□ -1.68
CDH13P55290 OR52E6-202ENST00000379946 954 ntBASIC4.58□□□□□ -1.68
CDH13P55290 SNORD65C-201ENST00000390962 71 ntBASIC4.58□□□□□ -1.68
CDH13P55290 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 RNU2-6P-201ENST00000411404 190 ntBASIC4.58□□□□□ -1.68
CDH13P55290 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH13P55290 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 PTP4A1P7-201ENST00000423476 514 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH13P55290 AP001324.1-201ENST00000428553 399 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AL450263.2-201ENST00000439400 589 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 RPS7P5-201ENST00000441482 581 ntBASIC4.58□□□□□ -1.68
CDH13P55290 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.58□□□□□ -1.68
CDH13P55290 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.58□□□□□ -1.68
CDH13P55290 TPTE2P6-202ENST00000445572 1007 ntBASIC4.58□□□□□ -1.68
CDH13P55290 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 TRY2P-201ENST00000448860 689 ntBASIC4.58□□□□□ -1.68
CDH13P55290 EIF4A1P11-201ENST00000451239 222 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH13P55290 AURKAPS2-201ENST00000454983 333 ntBASIC4.58□□□□□ -1.68
CDH13P55290 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.58□□□□□ -1.68
CDH13P55290 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CDH13P55290 RN7SL214P-201ENST00000487317 265 ntBASIC4.58□□□□□ -1.68
CDH13P55290 DEFB109F-201ENST00000491870 277 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC104971.1-201ENST00000495117 578 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC026414.1-201ENST00000504046 698 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC021146.3-201ENST00000511911 260 ntBASIC4.58□□□□□ -1.68
CDH13P55290 BTF3P13-201ENST00000513224 490 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH13P55290 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH13P55290 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 HMGB1P1-201ENST00000522557 636 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC010306.1-201ENST00000523223 1117 ntBASIC4.58□□□□□ -1.68
CDH13P55290 OR10G5P-201ENST00000532733 358 ntBASIC4.58□□□□□ -1.68
CDH13P55290 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH13P55290 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH13P55290 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH13P55290 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 MIR4789-201ENST00000577469 82 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC090312.2-201ENST00000582687 378 ntBASIC4.58□□□□□ -1.68
CDH13P55290 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH13P55290 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH13P55290 AC023509.5-201ENST00000617434 807 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC091905.4-201ENST00000623432 202 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AP002799.1-201ENST00000623552 423 ntBASIC4.58□□□□□ -1.68
CDH13P55290 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH13P55290 ATE1-AS1-202ENST00000636460 506 ntBASIC4.58□□□□□ -1.68
CDH13P55290 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
CDH13P55290 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH13P55290 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 IRF5P1-201ENST00000504852 2164 ntBASIC4.58□□□□□ -1.68
CDH13P55290 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH13P55290 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CDH13P55290 AC134882.1-201ENST00000603738 1676 ntBASIC4.57□□□□□ -1.68
CDH13P55290 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH13P55290 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDH13P55290 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH13P55290 MIR195-201ENST00000385194 87 ntBASIC4.57□□□□□ -1.68
CDH13P55290 OR51B3P-201ENST00000412287 913 ntBASIC4.57□□□□□ -1.68
CDH13P55290 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH13P55290 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH13P55290 AL354692.1-201ENST00000423044 315 ntBASIC4.57□□□□□ -1.68
CDH13P55290 Z74021.1-201ENST00000423610 407 ntBASIC4.57□□□□□ -1.68
CDH13P55290 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 ACTR3P2-201ENST00000439585 1257 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC000041.1-201ENST00000439655 175 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC002542.1-201ENST00000440683 193 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC009263.1-201ENST00000441193 1239 ntBASIC4.57□□□□□ -1.68
CDH13P55290 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 YWHAQP9-201ENST00000445891 512 ntBASIC4.57□□□□□ -1.68
CDH13P55290 SEPT14P24-201ENST00000447236 180 ntBASIC4.57□□□□□ -1.68
CDH13P55290 MYO5BP2-201ENST00000449815 1277 ntBASIC4.57□□□□□ -1.68
CDH13P55290 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms