Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC108463.1-201ENST00000450258 347 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC093392.2-201ENST00000450682 337 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC092324.1-201ENST00000468671 324 ntBASIC5.81□□□□□ -1.48
LTBRP36941 RN7SL165P-201ENST00000477476 291 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBRP36941 AC109464.2-201ENST00000510242 943 ntBASIC5.81□□□□□ -1.48
LTBRP36941 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBRP36941 RNU6-1261P-201ENST00000517194 104 ntBASIC5.81□□□□□ -1.48
LTBRP36941 RN7SKP283-201ENST00000517197 270 ntBASIC5.81□□□□□ -1.48
LTBRP36941 COX6B1P6-201ENST00000522347 255 ntBASIC5.81□□□□□ -1.48
LTBRP36941 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBRP36941 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBRP36941 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBRP36941 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBRP36941 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBRP36941 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBRP36941 MIR132-201ENST00000591554 101 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC107214.2-201ENST00000608204 634 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC006566.1-201ENST00000608943 513 ntBASIC5.81□□□□□ -1.48
LTBRP36941 uc_338.9-201ENST00000617424 182 ntBASIC5.81□□□□□ -1.48
LTBRP36941 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.81□□□□□ -1.48
LTBRP36941 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LTBRP36941 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBRP36941 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBRP36941 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBRP36941 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LTBRP36941 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LTBRP36941 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBRP36941 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 RAD17P2-201ENST00000451754 1977 ntBASIC5.8□□□□□ -1.48
LTBRP36941 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 AC104162.1-201ENST00000430831 2382 ntBASIC5.8□□□□□ -1.48
LTBRP36941 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 MFSD8-239ENST00000641590 2479 ntBASIC5.8□□□□□ -1.48
LTBRP36941 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LTBRP36941 RNA5SP123-201ENST00000363244 119 ntBASIC5.8□□□□□ -1.48
LTBRP36941 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 RNU1-149P-201ENST00000390870 161 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AL136133.1-201ENST00000413694 376 ntBASIC5.8□□□□□ -1.48
LTBRP36941 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 AC073069.1-201ENST00000428657 441 ntBASIC5.8□□□□□ -1.48
LTBRP36941 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBRP36941 AC096775.1-201ENST00000437724 448 ntBASIC5.8□□□□□ -1.48
LTBRP36941 RBMX2P4-201ENST00000441256 376 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AC079922.1-201ENST00000443291 359 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBRP36941 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 OR9M1P-201ENST00000459641 921 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBRP36941 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBRP36941 RN7SKP147-201ENST00000517154 244 ntBASIC5.8□□□□□ -1.48
LTBRP36941 IGHV3-32-201ENST00000519182 355 ntBASIC5.8□□□□□ -1.48
LTBRP36941 IGKV2-36-201ENST00000519999 223 ntBASIC5.8□□□□□ -1.48
LTBRP36941 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBRP36941 HMGB1P40-201ENST00000525121 540 ntBASIC5.8□□□□□ -1.48
LTBRP36941 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 AC087276.1-201ENST00000529659 480 ntBASIC5.8□□□□□ -1.48
LTBRP36941 SLC2A13P1-201ENST00000531560 322 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LTBRP36941 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 AC009063.1-201ENST00000563342 702 ntBASIC5.8□□□□□ -1.48
LTBRP36941 RPL10P14-201ENST00000565265 298 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 MIR4311-201ENST00000580794 100 ntBASIC5.8□□□□□ -1.48
LTBRP36941 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBRP36941 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.8□□□□□ -1.48
LTBRP36941 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 CYP4F35P-202ENST00000636121 390 ntBASIC5.8□□□□□ -1.48
LTBRP36941 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBRP36941 MAPK10-365ENST00000641902 3825 ntBASIC5.8□□□□□ -1.48
LTBRP36941 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
LTBRP36941 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 AC004520.1-201ENST00000608362 1413 ntBASIC5.8□□□□□ -1.48
LTBRP36941 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBRP36941 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms