Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4AP35499 MIR5684-201ENST00000585074 65 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4AP35499 AL138721.1-201ENST00000616756 179 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN4AP35499 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SCN4AP35499 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4AP35499 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN4AP35499 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN4AP35499 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN4AP35499 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN4AP35499 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN4AP35499 AC010300.1-201ENST00000600671 5134 ntBASIC4.91□□□□□ -1.62
SCN4AP35499 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN4AP35499 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCN4AP35499 SYF2P2-201ENST00000417620 583 ntBASIC4.91□□□□□ -1.62
SCN4AP35499 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN4AP35499 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN4AP35499 AP000942.1-201ENST00000463969 747 ntBASIC4.91□□□□□ -1.62
SCN4AP35499 RN7SL293P-201ENST00000481765 281 ntBASIC4.91□□□□□ -1.62
SCN4AP35499 WBP1LP4-201ENST00000505043 344 ntBASIC4.91□□□□□ -1.62
SCN4AP35499 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN4AP35499 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN4AP35499 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN4AP35499 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN4AP35499 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN4AP35499 AC090312.1-201ENST00000580637 348 ntBASIC4.91□□□□□ -1.62
SCN4AP35499 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN4AP35499 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN4AP35499 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN4AP35499 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCN4AP35499 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN4AP35499 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN4AP35499 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN4AP35499 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN4AP35499 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCN4AP35499 RNA5SP97-201ENST00000365006 84 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.9□□□□□ -1.62
SCN4AP35499 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SCN4AP35499 AC245052.5-201ENST00000416320 649 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 AC115115.1-201ENST00000449927 248 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 AL133244.1-201ENST00000456007 258 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.9□□□□□ -1.62
SCN4AP35499 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.9□□□□□ -1.62
SCN4AP35499 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.9□□□□□ -1.62
SCN4AP35499 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.9□□□□□ -1.62
SCN4AP35499 OR5M7P-201ENST00000526140 972 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 AC091516.1-201ENST00000549191 703 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 AC005000.2-201ENST00000605468 310 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 AC055839.1-201ENST00000634467 498 ntBASIC4.9□□□□□ -1.62
SCN4AP35499 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SCN4AP35499 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SCN4AP35499 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.9□□□□□ -1.62
SCN4AP35499 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SCN4AP35499 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SCN4AP35499 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
SCN4AP35499 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN4AP35499 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN4AP35499 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
SCN4AP35499 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN4AP35499 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SCN4AP35499 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SCN4AP35499 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN4AP35499 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN4AP35499 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN4AP35499 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SCN4AP35499 AL031985.2-201ENST00000600955 480 ntBASIC4.9□□□□□ -1.63
SCN4AP35499 AL160290.3-201ENST00000604869 165 ntBASIC4.9□□□□□ -1.63
SCN4AP35499 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN4AP35499 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN4AP35499 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SCN4AP35499 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN4AP35499 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SCN4AP35499 AC019072.1-201ENST00000604535 1551 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 AC007066.1-201ENST00000392902 381 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 RPS7P15-201ENST00000415804 584 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 OR4F13P-201ENST00000428478 931 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 AL358472.1-201ENST00000431295 329 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 AC092447.2-201ENST00000435487 669 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 NPM1P29-201ENST00000483112 803 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 RNA5SP249-201ENST00000516127 99 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN4AP35499 AC006064.5-201ENST00000541782 248 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 AC106782.4-201ENST00000568264 210 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN4AP35499 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN4AP35499 ELOCP35-201ENST00000604289 336 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 AC063923.1-201ENST00000478982 1619 ntBASIC4.89□□□□□ -1.63
SCN4AP35499 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SCN4AP35499 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN4AP35499 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN4AP35499 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4AP35499 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms