Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC040174.2-201ENST00000602701 465 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC055764.2-201ENST00000610089 670 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 MIR6780A-201ENST00000615089 68 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN6P29350 AL391684.1-202ENST00000641293 1636 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 SAGE2P-201ENST00000420011 2126 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTPN6P29350 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.34□□□□□ -1.72
PTPN6P29350 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PTPN6P29350 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.34□□□□□ -1.72
PTPN6P29350 AC125257.1-201ENST00000560400 2930 ntBASIC4.34□□□□□ -1.72
PTPN6P29350 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.34□□□□□ -1.72
PTPN6P29350 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 KARSP3-201ENST00000571212 1504 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AC010928.1-201ENST00000592477 1447 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 RAD1P1-201ENST00000231383 813 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PTPN6P29350 RNU6-317P-201ENST00000384031 107 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 RNU6-452P-201ENST00000384406 107 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 MIR298-201ENST00000401212 88 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN6P29350 RPL26P29-201ENST00000415623 438 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AC140479.3-201ENST00000418944 1126 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 MTCO1P52-201ENST00000433928 531 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AL359265.2-201ENST00000434367 631 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AC016831.4-201ENST00000438302 307 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 CEACAMP9-201ENST00000442990 513 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN6P29350 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 AC073264.2-201ENST00000448886 166 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 SCARNA10-201ENST00000459255 330 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 CABYRP1-201ENST00000465493 1045 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AC022795.1-201ENST00000473808 480 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN6P29350 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 OR5AN2P-201ENST00000534535 896 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN6P29350 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN6P29350 AL110118.1-201ENST00000553543 400 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN6P29350 AP005119.2-201ENST00000579735 1105 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 RN7SL176P-201ENST00000580352 264 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 CBX3P2-202ENST00000583365 535 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 NF1P5-201ENST00000588287 448 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN6P29350 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN6P29350 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 OR6R2P-201ENST00000609216 300 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN6P29350 AC025016.1-201ENST00000616746 682 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 AC010435.1-201ENST00000623353 1177 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 OR2L1P-202ENST00000641567 1023 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AL596275.2-204ENST00000641628 552 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AL596275.2-206ENST00000641957 626 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN6P29350 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 AC007529.1-201ENST00000418574 2178 ntBASIC4.33□□□□□ -1.72
PTPN6P29350 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN6P29350 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN6P29350 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN6P29350 RNF6P1-201ENST00000444889 1784 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PTPN6P29350 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN6P29350 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
PTPN6P29350 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN6P29350 AC079741.1-201ENST00000321498 212 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 AL590240.1-201ENST00000334118 313 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN6P29350 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN6P29350 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN6P29350 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN6P29350 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN6P29350 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN6P29350 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTPN6P29350 AC136624.1-201ENST00000400791 413 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 RN7SKP267-201ENST00000410381 285 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 AL807761.1-201ENST00000417622 171 ntBASIC4.32□□□□□ -1.72
PTPN6P29350 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN6P29350 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms