Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RN7SL826P-201ENST00000479724 288 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 HPRT1P2-201ENST00000505250 544 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 PRELID3BP4-201ENST00000515476 571 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.73□□□□□ -1.49
SMARCA1P28370 OSBPL9P5-201ENST00000542581 171 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AC025260.1-201ENST00000548858 430 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 LSM3P2-201ENST00000551246 273 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 CYP2C60P-201ENST00000566088 139 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC095057.3-201ENST00000567102 1157 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AP005262.1-201ENST00000582646 997 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AL353778.1-201ENST00000603149 408 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AL137072.1-201ENST00000603444 466 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC023813.4-201ENST00000607580 580 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC007349.4-201ENST00000608114 532 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC026422.1-201ENST00000623961 452 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 LINC02211-204ENST00000642024 1070 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 AC073055.1-201ENST00000456901 1621 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC104623.2-202ENST00000623477 4002 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 RN7SKP149-201ENST00000363008 344 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 MIR550A3-201ENST00000390735 95 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 OR2AM1P-201ENST00000422137 422 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AC007559.1-201ENST00000428736 355 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 MOB1AP1-201ENST00000430903 535 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AL591363.1-201ENST00000450091 483 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 OTX2P1-201ENST00000450956 354 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.72□□□□□ -1.49
SMARCA1P28370 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC091860.1-201ENST00000505723 432 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC105313.1-201ENST00000509121 353 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 RNA5SP392-201ENST00000516905 112 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.72□□□□□ -1.49
SMARCA1P28370 GCSHP4-201ENST00000538792 439 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.72□□□□□ -1.49
SMARCA1P28370 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 MTCYBP27-201ENST00000555160 670 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 BGLT3-201ENST00000564523 994 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 OR1F2P-201ENST00000570470 933 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC016877.3-201ENST00000606778 504 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.72□□□□□ -1.49
SMARCA1P28370 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 GTF2H2B-203ENST00000508065 1432 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMARCA1P28370 ADAM5-202ENST00000399789 1942 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.72□□□□□ -1.49
SMARCA1P28370 AC011447.7-201ENST00000624228 1590 ntBASIC5.72□□□□□ -1.49
SMARCA1P28370 AL031595.2-201ENST00000624215 19071 ntBASIC5.71□□□□□ -1.49
SMARCA1P28370 SMG1P6-201ENST00000532337 2930 ntBASIC5.71□□□□□ -1.49
SMARCA1P28370 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.71□□□□□ -1.49
SMARCA1P28370 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
SMARCA1P28370 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.71□□□□□ -1.49
SMARCA1P28370 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SMARCA1P28370 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.71□□□□□ -1.49
SMARCA1P28370 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms