Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 AL590704.1-201ENST00000402856 794 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 SEPT7P8-201ENST00000413308 775 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 TCEA1P4-201ENST00000415066 844 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.98□□□□□ -1.77
COL5A1P20908 ARL4AP3-201ENST00000441452 574 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC006517.1-201ENST00000480485 328 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC012158.1-204ENST00000483430 465 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 BNIP3P41-201ENST00000503774 571 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 HPRT1P2-201ENST00000505250 544 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.98□□□□□ -1.77
COL5A1P20908 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC022655.2-201ENST00000577280 318 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 MIR5684-201ENST00000585074 65 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC244517.3-201ENST00000616254 1235 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
COL5A1P20908 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 AL672167.1-205ENST00000641112 3080 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
COL5A1P20908 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL5A1P20908 U8.11-201ENST00000384699 133 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 U8.12-201ENST00000384701 133 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 RNU4-6P-201ENST00000410804 122 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 RAB9AP3-201ENST00000412737 573 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC073335.1-201ENST00000427776 363 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.98□□□□□ -1.77
COL5A1P20908 RAB9AP1-201ENST00000449393 573 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 U8.18-201ENST00000459285 133 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC012123.2-201ENST00000485809 248 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.98□□□□□ -1.77
COL5A1P20908 ASNSP4-201ENST00000511103 447 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC016550.3-201ENST00000515706 767 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 PHBP17-201ENST00000528576 541 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.98□□□□□ -1.77
COL5A1P20908 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.98□□□□□ -1.77
COL5A1P20908 AC005255.1-201ENST00000593748 216 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AC026979.4-201ENST00000606555 645 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 AL354798.1-201ENST00000622505 329 ntBASIC3.98□□□□□ -1.77
COL5A1P20908 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.98□□□□□ -1.77
COL5A1P20908 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL5A1P20908 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL5A1P20908 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
COL5A1P20908 AL049781.1-201ENST00000623195 3585 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.97□□□□□ -1.77
COL5A1P20908 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
COL5A1P20908 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL5A1P20908 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL5A1P20908 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
COL5A1P20908 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL5A1P20908 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
COL5A1P20908 SNORA60-201ENST00000362396 134 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.97□□□□□ -1.77
COL5A1P20908 AL358472.1-201ENST00000431295 329 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.97□□□□□ -1.77
COL5A1P20908 RPS11P1-201ENST00000451072 473 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 AC005008.1-201ENST00000456151 612 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 AC008481.1-201ENST00000463278 396 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 AL139099.1-201ENST00000497398 403 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 GMPSP1-201ENST00000514075 579 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.97□□□□□ -1.77
COL5A1P20908 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.97□□□□□ -1.77
COL5A1P20908 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 BNIP3P41-202ENST00000616656 861 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 MIR7702-201ENST00000621931 59 ntBASIC3.97□□□□□ -1.77
COL5A1P20908 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.97□□□□□ -1.77
COL5A1P20908 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC3.97□□□□□ -1.77
COL5A1P20908 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL5A1P20908 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL5A1P20908 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.96□□□□□ -1.77
COL5A1P20908 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL5A1P20908 PTMAP5-201ENST00000393073 333 ntBASIC3.96□□□□□ -1.78
COL5A1P20908 AC021146.3-201ENST00000511911 260 ntBASIC3.96□□□□□ -1.78
COL5A1P20908 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.96□□□□□ -1.78
COL5A1P20908 AC091516.1-201ENST00000549191 703 ntBASIC3.96□□□□□ -1.78
COL5A1P20908 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.96□□□□□ -1.78
COL5A1P20908 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.96□□□□□ -1.78
COL5A1P20908 AL442067.2-201ENST00000614033 363 ntBASIC3.96□□□□□ -1.78
COL5A1P20908 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.96□□□□□ -1.78
COL5A1P20908 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL5A1P20908 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL5A1P20908 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL5A1P20908 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
COL5A1P20908 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms