Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.68□□□□□ -1.34
LIG1P18858 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.68□□□□□ -1.34
LIG1P18858 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
LIG1P18858 AC011453.2-201ENST00000603737 729 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AC025449.1-201ENST00000603896 529 ntBASIC6.68□□□□□ -1.34
LIG1P18858 BNIP3P4-201ENST00000604946 565 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AC015712.7-201ENST00000615211 635 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AL445670.1-201ENST00000618889 801 ntBASIC6.68□□□□□ -1.34
LIG1P18858 MFSD8-219ENST00000641228 2559 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AC027228.2-201ENST00000567141 2154 ntBASIC6.68□□□□□ -1.34
LIG1P18858 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 Y_RNA.256-201ENST00000364594 104 ntBASIC6.67□□□□□ -1.34
LIG1P18858 RNU5A-6P-201ENST00000384136 116 ntBASIC6.67□□□□□ -1.34
LIG1P18858 RNA5SP105-201ENST00000391123 113 ntBASIC6.67□□□□□ -1.34
LIG1P18858 SNORD115-47-201ENST00000391226 86 ntBASIC6.67□□□□□ -1.34
LIG1P18858 RPL35AP3-201ENST00000414680 288 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 MTCO3P1-205ENST00000422088 832 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AL050321.1-201ENST00000432363 400 ntBASIC6.67□□□□□ -1.34
LIG1P18858 RPS10P18-201ENST00000442662 495 ntBASIC6.67□□□□□ -1.34
LIG1P18858 CFL1P4-201ENST00000451536 498 ntBASIC6.67□□□□□ -1.34
LIG1P18858 RPL23AP35-201ENST00000451906 501 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC092001.1-201ENST00000453012 261 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC098824.1-201ENST00000453565 980 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC083795.1-201ENST00000491760 320 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.67□□□□□ -1.34
LIG1P18858 AC008629.2-201ENST00000503783 483 ntBASIC6.67□□□□□ -1.34
LIG1P18858 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.67□□□□□ -1.34
LIG1P18858 BTG4P1-201ENST00000510421 183 ntBASIC6.67□□□□□ -1.34
LIG1P18858 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.67□□□□□ -1.34
LIG1P18858 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 AC114781.3-201ENST00000512083 142 ntBASIC6.67□□□□□ -1.34
LIG1P18858 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 PRMT5P1-201ENST00000514351 598 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.67□□□□□ -1.34
LIG1P18858 AP003396.4-201ENST00000527574 265 ntBASIC6.67□□□□□ -1.34
LIG1P18858 OR5BC1P-201ENST00000529327 739 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC009101.1-201ENST00000568135 242 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AP005119.1-201ENST00000580956 292 ntBASIC6.67□□□□□ -1.34
LIG1P18858 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.67□□□□□ -1.34
LIG1P18858 C8orf59P2-201ENST00000603441 271 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AC092954.2-201ENST00000609103 430 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AL021918.2-201ENST00000613415 194 ntBASIC6.67□□□□□ -1.34
LIG1P18858 MIR1910-201ENST00000636955 80 ntBASIC6.67□□□□□ -1.34
LIG1P18858 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.67□□□□□ -1.34
LIG1P18858 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
LIG1P18858 TCP11X1-202ENST00000622971 1372 ntBASIC6.67□□□□□ -1.34
LIG1P18858 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIG1P18858 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.67□□□□□ -1.34
LIG1P18858 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
LIG1P18858 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIG1P18858 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIG1P18858 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.66□□□□□ -1.34
LIG1P18858 RN7SKP275-201ENST00000364626 301 ntBASIC6.66□□□□□ -1.34
LIG1P18858 Y_RNA.302-201ENST00000364997 102 ntBASIC6.66□□□□□ -1.34
LIG1P18858 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.66□□□□□ -1.34
LIG1P18858 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIG1P18858 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIG1P18858 CIR1P3-201ENST00000405137 479 ntBASIC6.66□□□□□ -1.34
LIG1P18858 MIR1277-201ENST00000408536 78 ntBASIC6.66□□□□□ -1.34
LIG1P18858 RN7SKP59-201ENST00000410520 314 ntBASIC6.66□□□□□ -1.34
LIG1P18858 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.66□□□□□ -1.34
LIG1P18858 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.66□□□□□ -1.34
LIG1P18858 AC138393.2-201ENST00000414742 246 ntBASIC6.66□□□□□ -1.34
LIG1P18858 RPS4XP5-201ENST00000419038 768 ntBASIC6.66□□□□□ -1.34
LIG1P18858 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.66□□□□□ -1.34
LIG1P18858 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.66□□□□□ -1.34
LIG1P18858 MTND1P14-201ENST00000427400 950 ntBASIC6.66□□□□□ -1.34
LIG1P18858 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIG1P18858 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIG1P18858 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.66□□□□□ -1.34
LIG1P18858 AL445928.1-201ENST00000435545 222 ntBASIC6.66□□□□□ -1.34
LIG1P18858 HMGB1P45-201ENST00000435986 653 ntBASIC6.66□□□□□ -1.34
LIG1P18858 AL353093.1-201ENST00000441292 436 ntBASIC6.66□□□□□ -1.34
LIG1P18858 AL662791.1-201ENST00000441992 928 ntBASIC6.66□□□□□ -1.34
LIG1P18858 AC004865.1-201ENST00000442276 1003 ntBASIC6.66□□□□□ -1.34
LIG1P18858 RAB11AP1-201ENST00000442978 646 ntBASIC6.66□□□□□ -1.34
LIG1P18858 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.66□□□□□ -1.34
LIG1P18858 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.66□□□□□ -1.34
LIG1P18858 RPL9P6-201ENST00000492764 598 ntBASIC6.66□□□□□ -1.34
LIG1P18858 AL358832.1-201ENST00000497800 389 ntBASIC6.66□□□□□ -1.34
LIG1P18858 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.66□□□□□ -1.34
LIG1P18858 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms