Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPS4XP15-201ENST00000489210 795 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AC002456.2-201ENST00000509356 380 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 RNA5SP179-201ENST00000517284 121 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 HMGB1P19-201ENST00000517578 577 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.28□□□□□ -1.88
CCL3L1P16619 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AC069240.1-201ENST00000548774 375 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.28□□□□□ -1.88
CCL3L1P16619 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AC120057.2-201ENST00000571520 271 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCL3L1P16619 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL3L1P16619 AC091167.4-201ENST00000605079 184 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AC092653.1-201ENST00000608509 531 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AL451049.1-201ENST00000608672 497 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AC239803.2-201ENST00000610161 430 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.28□□□□□ -1.88
CCL3L1P16619 MIR6500-201ENST00000622700 86 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AC068724.3-201ENST00000625906 87 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL3L1P16619 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCL3L1P16619 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCL3L1P16619 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCL3L1P16619 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCL3L1P16619 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL3L1P16619 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCL3L1P16619 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCL3L1P16619 MTCO1P46-201ENST00000451639 1491 ntBASIC3.28□□□□□ -1.88
CCL3L1P16619 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CCL3L1P16619 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCL3L1P16619 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 FAM91A3P-201ENST00000456826 2544 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL3L1P16619 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC104118.1-201ENST00000607625 1589 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 RNU6-628P-201ENST00000410675 107 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 RPL7AP73-201ENST00000413490 353 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL3L1P16619 OR2X1P-201ENST00000421144 687 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 HSFY6P-201ENST00000445573 403 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 EIF2S2P5-201ENST00000457635 968 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 RPL7AP28-201ENST00000464513 571 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 PPIAP15-201ENST00000479662 484 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 RN7SL271P-201ENST00000487601 295 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 AC093267.1-201ENST00000489176 961 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 RPL31P61-201ENST00000496160 376 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL3L1P16619 FTH1P21-201ENST00000512179 511 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 AC108064.1-201ENST00000513791 460 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC091516.1-201ENST00000549191 703 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL3L1P16619 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC067959.1-201ENST00000604334 379 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL3L1P16619 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL3L1P16619 RNA5SP196-201ENST00000625967 102 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC138627.1-204ENST00000641894 765 ntBASIC3.27□□□□□ -1.89
CCL3L1P16619 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCL3L1P16619 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL3L1P16619 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL3L1P16619 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL3L1P16619 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL3L1P16619 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL3L1P16619 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCL3L1P16619 BTBD10P1-201ENST00000549824 1352 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 LINC02471-203ENST00000641941 4752 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL3L1P16619 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL3L1P16619 SNORD74.4-201ENST00000364129 80 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 RN7SKP227-201ENST00000364445 330 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL3L1P16619 RNA5SP306-201ENST00000411087 107 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 CYCSP10-201ENST00000417973 294 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 EIF2S2P3-201ENST00000428356 999 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.26□□□□□ -1.89
CCL3L1P16619 RPL21P89-201ENST00000444021 467 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 RANP8-201ENST00000444720 713 ntBASIC3.26□□□□□ -1.89
CCL3L1P16619 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.26□□□□□ -1.89
CCL3L1P16619 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL3L1P16619 AC068587.1-201ENST00000483613 781 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms