Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.51□□□□□ -1.69
RETP07949 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.51□□□□□ -1.69
RETP07949 BNIP3P19-201ENST00000605397 577 ntBASIC4.51□□□□□ -1.69
RETP07949 MIR8059-201ENST00000620427 81 ntBASIC4.51□□□□□ -1.69
RETP07949 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RETP07949 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.51□□□□□ -1.69
RETP07949 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 AP001002.1-201ENST00000625148 1513 ntBASIC4.51□□□□□ -1.69
RETP07949 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.5□□□□□ -1.69
RETP07949 EIF2AP4-201ENST00000424793 1781 ntBASIC4.5□□□□□ -1.69
RETP07949 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RETP07949 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 OR56B2P-201ENST00000317102 954 ntBASIC4.5□□□□□ -1.69
RETP07949 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RETP07949 RNU1-132P-201ENST00000364300 164 ntBASIC4.5□□□□□ -1.69
RETP07949 CYCSP19-201ENST00000411715 316 ntBASIC4.5□□□□□ -1.69
RETP07949 Z74021.1-201ENST00000423610 407 ntBASIC4.5□□□□□ -1.69
RETP07949 RPS26P47-201ENST00000427219 348 ntBASIC4.5□□□□□ -1.69
RETP07949 HMGB3P5-201ENST00000428894 612 ntBASIC4.5□□□□□ -1.69
RETP07949 AL117339.2-201ENST00000430475 180 ntBASIC4.5□□□□□ -1.69
RETP07949 AC007389.2-201ENST00000434630 306 ntBASIC4.5□□□□□ -1.69
RETP07949 RRM2P4-201ENST00000441721 562 ntBASIC4.5□□□□□ -1.69
RETP07949 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.5□□□□□ -1.69
RETP07949 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
RETP07949 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.5□□□□□ -1.69
RETP07949 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 FKBP1BP1-201ENST00000553366 325 ntBASIC4.5□□□□□ -1.69
RETP07949 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.5□□□□□ -1.69
RETP07949 AP005901.4-201ENST00000577336 569 ntBASIC4.5□□□□□ -1.69
RETP07949 AL135786.2-201ENST00000608422 615 ntBASIC4.5□□□□□ -1.69
RETP07949 AP003400.2-201ENST00000624036 666 ntBASIC4.5□□□□□ -1.69
RETP07949 AL672167.1-203ENST00000641299 2975 ntBASIC4.5□□□□□ -1.69
RETP07949 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
RETP07949 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.5□□□□□ -1.69
RETP07949 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.5□□□□□ -1.69
RETP07949 AC068254.2-201ENST00000623938 3577 ntBASIC4.5□□□□□ -1.69
RETP07949 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.5□□□□□ -1.69
RETP07949 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RETP07949 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RETP07949 AL136164.3-201ENST00000624429 3978 ntBASIC4.49□□□□□ -1.69
RETP07949 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.49□□□□□ -1.69
RETP07949 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RETP07949 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.49□□□□□ -1.69
RETP07949 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RETP07949 AL133412.1-201ENST00000380194 2992 ntBASIC4.49□□□□□ -1.69
RETP07949 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.49□□□□□ -1.69
RETP07949 RNA5SP513-201ENST00000364648 118 ntBASIC4.49□□□□□ -1.69
RETP07949 MIR200C-201ENST00000384980 68 ntBASIC4.49□□□□□ -1.69
RETP07949 LAP3P1-201ENST00000403648 294 ntBASIC4.49□□□□□ -1.69
RETP07949 RNA5SP146-201ENST00000410743 123 ntBASIC4.49□□□□□ -1.69
RETP07949 AL450992.3-201ENST00000413192 568 ntBASIC4.49□□□□□ -1.69
RETP07949 MTND4LP21-201ENST00000415303 295 ntBASIC4.49□□□□□ -1.69
RETP07949 CRYBB2P1-203ENST00000415709 538 ntBASIC4.49□□□□□ -1.69
RETP07949 MTCO1P54-201ENST00000430139 712 ntBASIC4.49□□□□□ -1.69
RETP07949 AC091564.1-201ENST00000464563 479 ntBASIC4.49□□□□□ -1.69
RETP07949 AC053481.1-201ENST00000467217 306 ntBASIC4.49□□□□□ -1.69
RETP07949 AC098799.3-201ENST00000506095 438 ntBASIC4.49□□□□□ -1.69
RETP07949 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RETP07949 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.49□□□□□ -1.69
RETP07949 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
RETP07949 AC090515.3-201ENST00000560431 315 ntBASIC4.49□□□□□ -1.69
RETP07949 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.49□□□□□ -1.69
RETP07949 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.49□□□□□ -1.69
RETP07949 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RETP07949 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RETP07949 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.49□□□□□ -1.69
RETP07949 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RETP07949 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RETP07949 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.49□□□□□ -1.69
RETP07949 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RETP07949 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.48□□□□□ -1.69
RETP07949 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RETP07949 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.48□□□□□ -1.69
RETP07949 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.48□□□□□ -1.69
RETP07949 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RETP07949 SNORA71.3-201ENST00000362582 128 ntBASIC4.48□□□□□ -1.69
RETP07949 SNORA11.2-201ENST00000408318 127 ntBASIC4.48□□□□□ -1.69
RETP07949 AC008280.1-201ENST00000418851 412 ntBASIC4.48□□□□□ -1.69
RETP07949 COX6CP15-201ENST00000426313 211 ntBASIC4.48□□□□□ -1.69
RETP07949 RWDD4P2-201ENST00000426392 563 ntBASIC4.48□□□□□ -1.69
RETP07949 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms