Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.3□□□□□ -1.56
COL5A2P05997 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL5A2P05997 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.29□□□□□ -1.56
COL5A2P05997 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL5A2P05997 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.29□□□□□ -1.56
COL5A2P05997 AC117434.1-201ENST00000419971 836 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL5A2P05997 AL445433.1-201ENST00000457507 257 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.29□□□□□ -1.56
COL5A2P05997 CAB39P1-201ENST00000502277 460 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 AC104619.4-201ENST00000510773 249 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.29□□□□□ -1.56
COL5A2P05997 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.29□□□□□ -1.56
COL5A2P05997 CYCSP28-201ENST00000534284 321 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 AC018690.1-201ENST00000608144 626 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 AC018816.2-201ENST00000621460 353 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 AL672167.1-205ENST00000641112 3080 ntBASIC5.29□□□□□ -1.56
COL5A2P05997 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL5A2P05997 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL5A2P05997 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
COL5A2P05997 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL5A2P05997 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.28□□□□□ -1.56
COL5A2P05997 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL5A2P05997 SNORD3H-201ENST00000384486 214 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 NDUFB4P4-201ENST00000404822 243 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 AL139039.2-201ENST00000407436 479 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 VDAC1P9-201ENST00000412766 841 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.28□□□□□ -1.56
COL5A2P05997 SETP9-201ENST00000423837 832 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL5A2P05997 RAD23BP3-201ENST00000454157 1152 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 PPIAP15-201ENST00000479662 484 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.28□□□□□ -1.56
COL5A2P05997 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.28□□□□□ -1.56
COL5A2P05997 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.28□□□□□ -1.56
COL5A2P05997 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.28□□□□□ -1.56
COL5A2P05997 MIR7975-201ENST00000619350 68 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 AC006213.5-201ENST00000619673 288 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.28□□□□□ -1.56
COL5A2P05997 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
COL5A2P05997 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL5A2P05997 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.28□□□□□ -1.56
COL5A2P05997 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.28□□□□□ -1.56
COL5A2P05997 AC008079.2-201ENST00000623543 20396 ntBASIC5.28□□□□□ -1.56
COL5A2P05997 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A2P05997 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A2P05997 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.27□□□□□ -1.57
COL5A2P05997 RPL7P4-203ENST00000430239 730 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 HSPE1P27-201ENST00000430808 296 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 TPTE2P1-204ENST00000435256 593 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 RN7SL293P-201ENST00000481765 281 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A2P05997 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 MTCO3P42-201ENST00000509488 518 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 MTCO3P39-201ENST00000514812 518 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 RNU6-751P-201ENST00000516382 101 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A2P05997 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.27□□□□□ -1.57
COL5A2P05997 MTND1P6-201ENST00000523621 946 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 PHBP17-201ENST00000528576 541 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.27□□□□□ -1.57
COL5A2P05997 RPL23AP87-202ENST00000573039 466 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 AC011471.1-201ENST00000585766 187 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 AC107993.1-201ENST00000591343 684 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 SNX6P1-201ENST00000601728 1224 ntBASIC5.27□□□□□ -1.57
COL5A2P05997 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL5A2P05997 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL5A2P05997 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL5A2P05997 RNA5SP97-201ENST00000365006 84 ntBASIC5.26□□□□□ -1.57
COL5A2P05997 MIR218-2-201ENST00000385006 110 ntBASIC5.26□□□□□ -1.57
COL5A2P05997 SNORD96B-201ENST00000386148 79 ntBASIC5.26□□□□□ -1.57
COL5A2P05997 AL358178.1-201ENST00000407698 397 ntBASIC5.26□□□□□ -1.57
COL5A2P05997 RPS29P4-201ENST00000414733 161 ntBASIC5.26□□□□□ -1.57
COL5A2P05997 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms