Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
HLA-DQB2P05538 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQB2P05538 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQB2P05538 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQB2P05538 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.76
HLA-DQB2P05538 AC015813.6-201ENST00000624409 5808 ntBASIC4.09□□□□□ -1.76
HLA-DQB2P05538 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
HLA-DQB2P05538 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQB2P05538 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQB2P05538 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 RLIMP1-201ENST00000339626 1680 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 HMGB3P19-201ENST00000403971 560 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 TRIM60P17-201ENST00000415181 719 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 RSL24D1P6-201ENST00000426934 401 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 TBCAP1-201ENST00000436520 327 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 VN1R25P-201ENST00000443385 738 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AC245100.2-201ENST00000454544 1679 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 VN1R40P-201ENST00000455196 941 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 IGBP1P5-201ENST00000507524 1000 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 IGHV3-63-201ENST00000518422 341 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AC105036.1-201ENST00000566222 271 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 MIR4675-201ENST00000577898 77 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AC008638.3-201ENST00000603341 463 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AC005229.3-201ENST00000603438 323 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 RNU4-89P-201ENST00000607443 133 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 MIR6810-201ENST00000622701 70 ntBASIC4.08□□□□□ -1.76
HLA-DQB2P05538 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB2P05538 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 LINC01109-201ENST00000603837 3081 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RNA5SP399-201ENST00000364003 117 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 MIR137-201ENST00000385223 102 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RPS24P12-201ENST00000402084 394 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RPL21P65-201ENST00000406094 466 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RNU4-6P-201ENST00000410804 122 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AL160275.2-201ENST00000412010 394 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RCC2P2-201ENST00000422174 918 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 NPM1P48-201ENST00000436002 853 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RPL7L1P1-201ENST00000448259 785 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 FABP3P2-201ENST00000453169 399 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RPS7P7-201ENST00000463499 571 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RPL23AP2-201ENST00000471227 466 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RN7SL860P-201ENST00000473738 223 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 RFPL4AP3-201ENST00000515267 345 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 KCTD9P6-201ENST00000522306 950 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 GNRHR2P1-201ENST00000555315 631 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms