Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 MIR1179-201ENST00000408703 91 ntBASIC1.77□□□□□ -2.13
USH2AO75445 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 DPY19L1P2-201ENST00000426647 915 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AL671855.1-201ENST00000446875 1203 ntBASIC1.77□□□□□ -2.13
USH2AO75445 RNA5SP497-201ENST00000516081 97 ntBASIC1.77□□□□□ -2.13
USH2AO75445 IGKV2-38-201ENST00000517443 247 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.77□□□□□ -2.13
USH2AO75445 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 LINC01109-201ENST00000603837 3081 ntBASIC1.77□□□□□ -2.13
USH2AO75445 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 FTX-215ENST00000638681 9771 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
USH2AO75445 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
USH2AO75445 EI24P3-201ENST00000399046 1062 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AL158071.1-201ENST00000430315 461 ntBASIC1.77□□□□□ -2.13
USH2AO75445 HLA-N-201ENST00000437516 135 ntBASIC1.77□□□□□ -2.13
USH2AO75445 HMGB1P5-202ENST00000451497 985 ntBASIC1.77□□□□□ -2.13
USH2AO75445 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 RPL23AP37-201ENST00000479658 549 ntBASIC1.77□□□□□ -2.13
USH2AO75445 HMGB1P21-201ENST00000502313 581 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 RNU6-991P-201ENST00000516168 107 ntBASIC1.77□□□□□ -2.13
USH2AO75445 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.77□□□□□ -2.13
USH2AO75445 TEX41-256ENST00000626411 368 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC1.77□□□□□ -2.13
USH2AO75445 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC1.77□□□□□ -2.13
USH2AO75445 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
USH2AO75445 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 GNG5P1-201ENST00000255500 204 ntBASIC1.76□□□□□ -2.13
USH2AO75445 Y_RNA.226-201ENST00000364337 114 ntBASIC1.76□□□□□ -2.13
USH2AO75445 RN7SKP167-201ENST00000411047 285 ntBASIC1.76□□□□□ -2.13
USH2AO75445 RHEBP2-201ENST00000450289 600 ntBASIC1.76□□□□□ -2.13
USH2AO75445 OR52Y1P-201ENST00000452418 828 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 HMGN1P11-201ENST00000508668 303 ntBASIC1.76□□□□□ -2.13
USH2AO75445 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
USH2AO75445 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
USH2AO75445 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
USH2AO75445 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
USH2AO75445 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC1.76□□□□□ -2.13
USH2AO75445 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 AP004289.2-201ENST00000444413 1457 ntBASIC1.76□□□□□ -2.13
USH2AO75445 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 AC010266.2-201ENST00000564741 3255 ntBASIC1.76□□□□□ -2.13
USH2AO75445 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
USH2AO75445 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC1.76□□□□□ -2.13
USH2AO75445 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
USH2AO75445 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC1.76□□□□□ -2.13
USH2AO75445 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC1.76□□□□□ -2.13
USH2AO75445 AC007786.3-201ENST00000615154 596 ntBASIC1.76□□□□□ -2.13
USH2AO75445 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 AL137141.1-201ENST00000624622 4836 ntBASIC1.76□□□□□ -2.13
USH2AO75445 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 AC021755.1-201ENST00000559747 1447 ntBASIC1.76□□□□□ -2.13
USH2AO75445 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 BMS1P3-201ENST00000372011 932 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.76□□□□□ -2.13
USH2AO75445 ATP5A1P2-201ENST00000412323 255 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AC096644.3-201ENST00000416788 338 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC1.76□□□□□ -2.13
USH2AO75445 AC090686.1-201ENST00000481577 749 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC1.76□□□□□ -2.13
USH2AO75445 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 MIR4425-201ENST00000580572 84 ntBASIC1.76□□□□□ -2.13
USH2AO75445 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
USH2AO75445 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms