Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUX2O14529 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUX2O14529 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.13□□□□□ -1.27
CUX2O14529 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC7.13□□□□□ -1.27
CUX2O14529 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUX2O14529 RPL23AP81-201ENST00000455252 467 ntBASIC7.13□□□□□ -1.27
CUX2O14529 AC025518.1-201ENST00000479856 347 ntBASIC7.13□□□□□ -1.27
CUX2O14529 RNA5SP446-201ENST00000515955 82 ntBASIC7.13□□□□□ -1.27
CUX2O14529 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC7.13□□□□□ -1.27
CUX2O14529 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.13□□□□□ -1.27
CUX2O14529 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC7.13□□□□□ -1.27
CUX2O14529 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC7.13□□□□□ -1.27
CUX2O14529 MIR4672-201ENST00000583126 81 ntBASIC7.13□□□□□ -1.27
CUX2O14529 AL160290.3-201ENST00000604869 165 ntBASIC7.13□□□□□ -1.27
CUX2O14529 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.13□□□□□ -1.27
CUX2O14529 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CUX2O14529 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CUX2O14529 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
CUX2O14529 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC7.13□□□□□ -1.27
CUX2O14529 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUX2O14529 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUX2O14529 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUX2O14529 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUX2O14529 RNA5SP175-201ENST00000364275 119 ntBASIC7.12□□□□□ -1.27
CUX2O14529 PEX12P1-201ENST00000400284 1048 ntBASIC7.12□□□□□ -1.27
CUX2O14529 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CUX2O14529 RPL6P21-201ENST00000418672 846 ntBASIC7.12□□□□□ -1.27
CUX2O14529 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.12□□□□□ -1.27
CUX2O14529 NMNAT1P2-201ENST00000435192 860 ntBASIC7.12□□□□□ -1.27
CUX2O14529 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.12□□□□□ -1.27
CUX2O14529 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.12□□□□□ -1.27
CUX2O14529 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.12□□□□□ -1.27
CUX2O14529 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUX2O14529 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CUX2O14529 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
CUX2O14529 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUX2O14529 ZNF962P-201ENST00000443465 3140 ntBASIC7.12□□□□□ -1.27
CUX2O14529 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC7.12□□□□□ -1.27
CUX2O14529 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC7.12□□□□□ -1.27
CUX2O14529 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CUX2O14529 AC008155.2-201ENST00000464337 397 ntBASIC7.11□□□□□ -1.27
CUX2O14529 AC012158.1-204ENST00000483430 465 ntBASIC7.11□□□□□ -1.27
CUX2O14529 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.11□□□□□ -1.27
CUX2O14529 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.11□□□□□ -1.27
CUX2O14529 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.11□□□□□ -1.27
CUX2O14529 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC7.11□□□□□ -1.27
CUX2O14529 AC005344.1-201ENST00000613391 459 ntBASIC7.11□□□□□ -1.27
CUX2O14529 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
CUX2O14529 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CUX2O14529 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC7.11□□□□□ -1.27
CUX2O14529 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CUX2O14529 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC7.11□□□□□ -1.27
CUX2O14529 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CUX2O14529 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.11□□□□□ -1.27
CUX2O14529 OR4F13P-201ENST00000428478 931 ntBASIC7.11□□□□□ -1.27
CUX2O14529 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC7.11□□□□□ -1.27
CUX2O14529 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.11□□□□□ -1.27
CUX2O14529 DDX39BP2-208ENST00000453923 258 ntBASIC7.11□□□□□ -1.27
CUX2O14529 RNA5SP303-201ENST00000516192 130 ntBASIC7.11□□□□□ -1.27
CUX2O14529 HIGD1AP18-201ENST00000520730 278 ntBASIC7.11□□□□□ -1.27
CUX2O14529 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUX2O14529 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.11□□□□□ -1.27
CUX2O14529 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC7.1□□□□□ -1.27
CUX2O14529 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CUX2O14529 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 AP000641.1-201ENST00000531988 1639 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AC097504.1-201ENST00000515103 2415 ntBASIC7.1□□□□□ -1.27
CUX2O14529 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 GNG5P1-201ENST00000255500 204 ntBASIC7.1□□□□□ -1.27
CUX2O14529 OR56B2P-201ENST00000317102 954 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AL359643.1-201ENST00000404109 423 ntBASIC7.1□□□□□ -1.27
CUX2O14529 HSPE1P12-201ENST00000412576 301 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AC062016.2-201ENST00000420950 676 ntBASIC7.1□□□□□ -1.27
CUX2O14529 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.1□□□□□ -1.27
CUX2O14529 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC7.1□□□□□ -1.27
CUX2O14529 AL831737.1-201ENST00000441288 271 ntBASIC7.1□□□□□ -1.27
CUX2O14529 EIF4A1P11-201ENST00000451239 222 ntBASIC7.1□□□□□ -1.27
CUX2O14529 RPL21P8-201ENST00000465083 535 ntBASIC7.1□□□□□ -1.27
CUX2O14529 RN7SL807P-201ENST00000470923 297 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AC010486.1-201ENST00000511793 424 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.1□□□□□ -1.27
CUX2O14529 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.1□□□□□ -1.27
CUX2O14529 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUX2O14529 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.1□□□□□ -1.27
CUX2O14529 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC7.1□□□□□ -1.27
CUX2O14529 AC012493.2-201ENST00000595083 291 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AC005034.4-201ENST00000603612 899 ntBASIC7.1□□□□□ -1.27
CUX2O14529 BNIP3P10-201ENST00000605360 577 ntBASIC7.1□□□□□ -1.27
CUX2O14529 AC007546.2-201ENST00000623996 360 ntBASIC7.1□□□□□ -1.27
CUX2O14529 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC7.1□□□□□ -1.27
CUX2O14529 AP002512.4-202ENST00000641599 4530 ntBASIC7.09□□□□□ -1.27
CUX2O14529 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC7.09□□□□□ -1.27
CUX2O14529 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC7.09□□□□□ -1.27
CUX2O14529 FAP-203ENST00000443424 2598 ntTSL 2 BASIC7.09□□□□□ -1.27
CUX2O14529 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUX2O14529 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms