Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRRM4A7MD48 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 SNORA70-201ENST00000384436 135 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL021331.1-201ENST00000402817 582 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL592291.1-201ENST00000403830 352 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 IPMKP1-201ENST00000425988 855 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC004938.1-201ENST00000438468 308 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 HMGB1P48-201ENST00000446155 598 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 MTND1P33-201ENST00000446251 917 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 MRPL35P4-201ENST00000453682 566 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC091959.2-201ENST00000477363 321 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 CAB39P1-201ENST00000502277 460 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 RN7SKP147-201ENST00000517154 244 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 OR4U1P-201ENST00000554958 912 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 HNRNPCP4-201ENST00000571636 900 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC011453.2-201ENST00000603737 729 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL158050.2-201ENST00000605336 568 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC112503.1-201ENST00000608436 391 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL391834.2-201ENST00000609982 546 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC012414.7-202ENST00000622705 1090 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL353662.3-201ENST00000625131 237 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC004808.1-201ENST00000627671 721 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AL445984.1-201ENST00000637834 659 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC139713.2-210ENST00000641741 992 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SRRM4A7MD48 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRRM4A7MD48 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRRM4A7MD48 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.9□□□□□ -1.79
SRRM4A7MD48 AC126323.6-202ENST00000568092 3511 ntBASIC3.9□□□□□ -1.79
SRRM4A7MD48 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SRRM4A7MD48 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 MIR765-201ENST00000390226 114 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 U3.35-201ENST00000408405 208 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 RN7SKP125-201ENST00000410481 302 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 GTF2IP5-201ENST00000414608 731 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 RPL30P3-201ENST00000424262 333 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 ELOCP6-201ENST00000429066 328 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 RPL37P1-201ENST00000432310 284 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 CEACAMP1-201ENST00000434624 1035 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 RPL7P11-201ENST00000437586 658 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AL450263.2-201ENST00000439400 589 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC005002.1-201ENST00000447458 540 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 HMGB3P21-201ENST00000452483 547 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 CYCSP34-201ENST00000458172 304 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 ELOCP12-201ENST00000458706 328 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC140172.1-201ENST00000502928 141 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC069306.1-201ENST00000507006 843 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 PGBD4P4-201ENST00000509673 613 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 IGJP1-201ENST00000522682 475 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC104417.1-201ENST00000523974 751 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC139103.1-201ENST00000534696 1030 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC090022.1-201ENST00000546569 311 ntBASIC3.89□□□□□ -1.79
SRRM4A7MD48 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SRRM4A7MD48 HAUS8P1-201ENST00000549005 542 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms