Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-316P-201ENST00000391027 107 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 RNA5SP35-201ENST00000391257 129 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 MRPL42P2-201ENST00000403169 426 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 RN7SKP151-201ENST00000410230 316 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 RNU6-373P-201ENST00000411247 98 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL359704.1-201ENST00000411586 781 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC211486.3-201ENST00000412694 621 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AP000534.2-201ENST00000412729 568 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 SNRPFP1-201ENST00000414761 252 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL354707.3-201ENST00000427308 331 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 RPS10P18-201ENST00000442662 495 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 HMGB1P7-201ENST00000450921 612 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 OR5M2P-201ENST00000529003 936 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC037471.2-201ENST00000564941 598 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 MIR1273F-201ENST00000580581 99 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC024085.1-201ENST00000604299 432 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC009027.1-201ENST00000604510 479 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AP000942.4-201ENST00000604811 241 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AL162730.1-201ENST00000605734 292 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC068722.2-201ENST00000618734 544 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC103564.3-201ENST00000621194 220 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC069234.4-201ENST00000621276 412 ntBASIC5.55□□□□□ -1.52
SHISA3A0PJX4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHISA3A0PJX4 AC140134.1-201ENST00000511830 3544 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AP000473.2-201ENST00000602659 1537 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC123769.1-201ENST00000530992 3192 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 FRG1BP-201ENST00000278882 761 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 RPL23AP57-201ENST00000332361 466 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 FRG1CP-201ENST00000358464 769 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 SNORD81.2-201ENST00000365153 76 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 Y_RNA.326-201ENST00000365176 113 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 U3.23-201ENST00000391132 200 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 RPL23AP32-201ENST00000395315 459 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 RPL7P58-201ENST00000402913 758 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 RN7SKP268-201ENST00000411107 316 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL161742.1-201ENST00000418154 584 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC008280.1-201ENST00000418851 412 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 OR10T1P-201ENST00000424327 947 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC009303.1-201ENST00000426307 352 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC016027.5-201ENST00000427227 210 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL590399.2-201ENST00000427536 309 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 SAR1AP4-201ENST00000429225 591 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC010881.1-201ENST00000433830 235 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 TAAR7P-201ENST00000436141 242 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC004980.3-201ENST00000447046 365 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC140076.1-201ENST00000449897 361 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.54□□□□□ -1.52
SHISA3A0PJX4 SRP68P2-201ENST00000456184 254 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC090142.1-201ENST00000465776 462 ntBASIC5.54□□□□□ -1.52
SHISA3A0PJX4 AC010301.1-201ENST00000473936 355 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms